Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq497144 140 9e-29 seq136258 89.7 1e-13 seq153502 84.2 6e-12 seq410746 82.4 2e-11 >seq497144 Length=1636 Score = 140 bits (154), Expect = 9e-29 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || || ||||| || || ||||| | || || | ||||||||| | ||| ||||||||| Sbjct 1330 CCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGCTTGCCGAACAGCACAACGCGGTGC 1271 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 ||||| || || || ||| ||||||||||||||||| ||||| ||| || || ||| Sbjct 1270 CATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTGTCGCGCCAGGATTCGGAGGTAGCC 1211 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 || |||||||| |||||| |||| || ||| |||||| ||||||||||| | ||| Sbjct 1210 AGAGTGATGTTGGCAACGGCACCGCCATTCGGCATGTAGCGAACTTCCGGGTCCTGCCCC 1151 Query 23719 AG 23720 || Sbjct 1150 AG 1149 >seq136258 Length=1331 Score = 89.7 bits (98), Expect = 1e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 23547 CAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGCCATTCGGT 23606 ||| || || || || | || || | ||||| || | || || ||||||||||| || Sbjct 145 CAGGTATTCACCCGCGACTTCAGCCAGTTTGCCAAACAGAACCACACGGTGCCATTCAGT 204 Query 23607 CTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCCAGGCTGAT 23666 | || ||| || |||||||||||||| |||| |||||||||| ||||| | || Sbjct 205 GATCTCTTTGTTTTCACCGGTCTGCTTGTCGCGCCAGCTTTCCGACGTAGCCAGCGTAAT 264 Query 23667 GTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCCAG 23720 |||| || || | || ||| ||| || || |||||||| || | |||||| Sbjct 265 GTTGGCAACAGCGCCACCATTTGGCATATAACGTACTTCCGGATCCTGACCCAG 318 >seq153502 Length=4143 Score = 84.2 bits (92), Expect = 6e-12 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 || || |||||||| ||||| |||| || || | || ||||| ||||| || |||||| Sbjct 2043 CCTTTACGCAGATATTCGCCAGCAACTTCTGCTAATTTACCGAACAACACAACACGGTGC 2102 Query 23599 CATTCGGTCTTTTCCTTGCGCTCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCC 23658 ||||| || | || || || ||||| ||||| || |||| |||| || || ||| Sbjct 2103 CATTCAGTAATCTCTTTATTTTCACCGGTTTGCTTATCACGCCAGCTTTCAGAGGTTGCC 2162 Query 23659 AGGCTGATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCC 23718 || | ||||| || || | || ||| ||| || || ||||| || || | |||| Sbjct 2163 AGTGTAATGTTTGTCACAGCCCCTCCATTTGGCATATACCGGACTTCTGGATCTTGACCC 2222 Query 23719 A 23719 | Sbjct 2223 A 2223 >seq410746 Length=249 Score = 82.4 bits (90), Expect = 2e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 23539 CCCTTGCGCAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGC 23598 ||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||| Sbjct 180 CCCTTGCGCAGGTACTCGCCGGCGATCTCGCCGAGCTTGCCGAAGAAGGTCACCCGGTGC 121 Query 23599 CATTCGGT 23606 |||||||| Sbjct 120 CATTCGGT 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138457494456652