Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq23619 86.0 2e-12 seq178804 84.2 8e-12 >seq23619 Length=121051 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 120741 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 120682 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 120681 GCTCTACTCCGC 120670 >seq178804 Length=65803 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||| | | |||| ||| ||||||||| |||||||||| | Sbjct 29101 GTTGCGGAGACAGGATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAG 29042 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 29041 CTGCTCTACCCCGC 29028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180526610943102