Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_023601.1 Length=97906 Score E Sequences producing significant alignments: (Bits) Value seq161181 170 1e-37 >seq161181 Length=1368 Score = 170 bits (188), Expect = 1e-37 Identities = 311/452 (69%), Gaps = 29/452 (6%) Strand=Plus/Plus Query 84876 AAGG-GATTTCTTCAATGGTGATGGTGTGAATTATGTGTACGATCACGACTCGATTCATG 84934 |||| || ||||| ||||||||||||| || || | || ||||| || | |||||| Sbjct 328 AAGGTGAATTCTTTGATGGTGATGGTGTAAACTACATCTATGATCATGATACTATTCATC 387 Query 84935 AAGCTGTAGCACTCAATTGGTGCCTTG------------GCCCTAAACCAGCCTACACCT 84982 |||| ||| | | | | | ||| ||| | | || || ||||| | Sbjct 388 TGACTGTTGCATTGATTAGCGGAATTGATTATATTGGTAGCCGTCATCCTGCATACACTT 447 Query 84983 TCTATATGAAGGACGGCTCTGAGGTTATGACCAGCAAGGTTAAGTTCTTCTCTGTTGACG 85042 |||| ||||| || || | || |||||||| || | ||| || || |||| || | Sbjct 448 TCTACATGAAAGATGGTGAACAAGTGATGACCAGTAAAGATAAATTTTTTGCTGTAGATG 507 Query 85043 A-GAGTATCCGTCTTGAGGGTGTCTATGAAGAGTCCTGTGTACTCGCCCTTGAGCGTTCT 85101 | ||| || ||||| || || |||||||| | |||||||| || ||||||||| Sbjct 508 AAGAG-ATTCGTCTGTTTGGGGTTTATGAAGAAACTTGTGTACTTGCTCTTGAGCGTAGC 566 Query 85102 CAGATTCCTCATGGCTTGGGTAAGGAAGGTGGGCCATCGGCTCGCTGGAGCTTTGAAATG 85161 || ||||| || ||| || ||| | || || | || |||||| | Sbjct 567 CAAATTCCGTTTGACTTCA------AA------CCAGCTGCACGTTATAGTTTTGAACTT 614 Query 85162 GCTCTGATGAAGGTGTGTACCAGCATCACCAGCGGATGGTTCCGTGAATATGCTTGGGAA 85221 || ||||||| || ||||| |||||||| || || ||||||||||||||||||||| | Sbjct 615 GCCTTGATGAAAGTTTGTACTAGCATCACAAGTGGTTGGTTCCGTGAATATGCTTGGAAC 674 Query 85222 AATTATCAGAAAGTGCTTGACCTGTAT-AACGAGTTGGGCGAGAATGACTACATCGAACG 85280 |||||| | |||||||||||| ||||| | ||| |||| || |||||||| || ||| | Sbjct 675 AATTATGACAAAGTGCTTGACTTGTATGAGCGA-ATGGGAGAAAATGACTATATTGAAAG 733 Query 85281 GTTCAACAGAAACAACCACTTACTGAAACCAT 85312 ||||| | || | || || || ||||||| Sbjct 734 ATTCAAACGTAATCAACATTTGCTAAAACCAT 765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 311268966797327