Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq416309 82.4 7e-11 >seq416309 Length=254 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 50513 CATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGA 50572 |||||| | ||||| || | |||||| | || || || | ||||||||||| | Sbjct 225 CATCGAGCAGGAGTTCCTCTCCGACGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAA 166 Query 50573 CATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCAGCTGGGACAAC 50631 | | |||||| ||||||||||||| || || ||| | || | | ||| || || |||| Sbjct 165 CCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCCTCGCA-CTCGG-CAAC 108 Query 50632 -CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGC 50690 ||| | ||| ||||| |||||||| || ||| | ||||| || | | ||| Sbjct 107 AAGAAGTTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGC 48 Query 50691 AAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726 || || ||||| ||||| | ||||| ||||| ||| Sbjct 47 AAGACCAACTTCTTCGAGAAGCGTGTCGGCGAGTAC 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485495357197200