Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq32733 149 3e-31 seq228004 122 4e-23 seq430283 86.0 3e-12 >seq32733 Length=979 Score = 149 bits (164), Expect = 3e-31 Identities = 213/296 (72%), Gaps = 13/296 (4%) Strand=Plus/Minus Query 66517 GCCGAGCTCGAAGGCGACATCGGGGAC-AG-TCACGTCGGCCTGCACGCGCGCCTCATGT 66574 ||||| |||||||||| || || ||| || | || |||||||| || ||||| ||| Sbjct 291 GCCGAAATCGAAGGCGAAATGGGTGACCAGCTGCCG--GGCCTGCAGGCCCGCCTGATGA 234 Query 66575 CGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGG 66634 |||||| |||||||||| ||||||| |||| || ||||||| ||| | ||| Sbjct 233 GCCAGGCCCTGCGCAAGCTGACCGGCAACATCAAGCGCTCCAACACCCTGGTGGTCTTCA 174 Query 66635 TCAACCAGTTGCGCGAGAAGATCGGCAACGTG------GGCTACGGCCCGAACGAGACCA 66688 |||||||| ||||| |||||||||| || ||| | ||||| | | ||||| Sbjct 173 TCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCA 114 Query 66689 CCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCG 66748 || |||||||| || ||| |||||||||||| || ||| |||| ||||||| |||| Sbjct 113 CC---GGCGGCAACGCACTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGTCGTATCG 57 Query 66749 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTC 66804 | | ||| | ||||| ||| ||||||||| ||| | | ||||||||| Sbjct 56 GCGCGATCAAGAAGGGCGACGAGATCATCGGCAACCAGACCAAGATCAAGGTCGTC 1 >seq228004 Length=3045 Score = 122 bits (134), Expect = 4e-23 Identities = 489/756 (65%), Gaps = 23/756 (3%) Strand=Plus/Plus Query 66234 GGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCA 66293 |||||| | || || |||||||| || || |||||||| || | || ||| ||| || Sbjct 313 GGGCCGTATCGTTGAGATCTACGGACCTGAGTCTTCAGGTAAAACCACGCTGACTCTGCA 372 Query 66294 CGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTC 66353 | | || ||| ||| ||| | | |||| ||||| || ||||| | Sbjct 373 GGTTATCGCATCTGCACAGCGTAAAGGTAAAACCTGTGCCTTTATCGATGCCGAGCATGC 432 Query 66354 CCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGT-TC 66412 || || || | ||||||||| ||||| || ||| | || ||||| | || | || Sbjct 433 GCTTGATCCGGTTTACGCCAAGAAACTCGGCGTAGACATTGATAACCTGCTC-TGCTCTC 491 Query 66413 AGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGC 66472 |||| |||||||| |||||||| ||||| ||| ||| || | ||||| | Sbjct 492 AGCCAGACACTGGTGAGCAGGCGCTGGAAATCTGTGATGCGCTGGCGCGCTCTGGTGCCG 551 Query 66473 TGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCG 66532 | | | || |||| ||||| || ||||| ||| ||| || || ||||||| | Sbjct 552 TTGACGTGATCATCGTCGACTCCGTCGCGGCGCTGACGCCTAAAGCGGAAATCGAAGGTG 611 Query 66533 ACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGC 66592 | ||||| ||| ||| | ||||| || || | ||| ||||| ||||| || | Sbjct 612 AAATCGGTGACTCACACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAAC 671 Query 66593 TCACCGGCACCATCTCCAGCA--CCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGA 66650 | |||| | | || |||| |||| || ||| | | | |||||||| | || Sbjct 672 TGGCCGGTAAC--CTGAAGCAGTCCAATACCCTGCTGATTTTCATCAACCAGATCCGTAT 729 Query 66651 GAAGATCGGCA--ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTG 66708 ||| || || | || | || |||| || |||||||| || || || || || Sbjct 730 GAAAATTGGTGTGATGTTTGGTAA--CCCG---GAAACCACCACTGGTGGTAACGCGCTG 784 Query 66709 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 66768 | |||||||||||| ||||| | ||| |||| || |||| | || || |||||| Sbjct 785 AAGTTCTACGCCTCTGTCCGTCTTGATATCCGCCGTATCGGTGCAATCAAAGAGGGCGAT 844 Query 66769 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66828 | | ||||||| ||||| || || || || || ||||| | ||| |||| | Sbjct 845 AACGTGGTCGGCAGTGAGACCCGCGTTAAAGTGGTGAAAAACAAAATCGCCGCGCCATTC 904 Query 66829 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC-TCGCGTGAGGTCGAACTCCT 66887 | || |||||| || ||||||| || || ||| | | ||| || || | Sbjct 905 AAACAGGCTGAGTTCCAGATCATGTACGGCGAAGGTATCAATACCTTTGGT-GAGCTGGT 963 Query 66888 CGACCTGGCCGTGTCGCAGGGCCTG-GTGAAGAAGTCGGGCGCCTGGTTCAAGTAC---G 66943 |||||||| |||| ||| ||| |||| ||| |||| || |||| || ||| | Sbjct 964 CGACCTGGGCGTGAAGCACAAGCTGATTGAAAAAG-CGGGTGCATGGTACAGCTACAATG 1022 Query 66944 GGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCG 66979 | ||||||| | | |||||| || | || |||| Sbjct 1023 GCGACAAGA---TTGGTCAGGGTAAATCGAATGCCG 1055 >seq430283 Length=268 Score = 86.0 bits (94), Expect = 3e-12 Identities = 111/152 (73%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 66310 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTA- 66368 ||||||||||| |||| ||| || | |||||| || |||||| | || ||||| | ||| Sbjct 16 CAGAAGGCCGGCGGCACCGCGGCGTTCATCGATGCCGAGCACGCGCTCGACCCGGTGTAT 75 Query 66369 --CGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66426 ||||| |||||| || || |||| | || || | |||||||| || ||| Sbjct 76 GCGGCCAA---GCTCGGCGTCAACGTCGAGGATCTGCTGCTCAGCCAGCCGGATACCGGC 132 Query 66427 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGT 66458 |||||||| |||||||||| ||| | || || Sbjct 133 GAGCAGGCGCTGGAGATCGCCGACATGCTGGT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242423206170201