Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_023690.1 Length=110569 Score E Sequences producing significant alignments: (Bits) Value seq213894 95.1 9e-15 seq72351 82.4 5e-11 >seq213894 Length=28734 Score = 95.1 bits (104), Expect = 9e-15 Identities = 131/183 (72%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 97125 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 97184 ||| | ||| | ||| || ||||| || | ||||| || || || |||||||| ||||| Sbjct 15609 CGGGATGTTAGCTTTAATCAGGCCGGTAATGACATCGACTGACGGACGCTGCGTTGCCAG 15668 Query 97185 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 97244 || || |||||||| ||||| ||||| ||||| || | ||| | || | || || Sbjct 15669 CACCAGGTGAATACCCGCTGCACGCGCTTTCTGCGCCAGGCGAGCGATCAGCTCTTCCAC 15728 Query 97245 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTA 97304 | |||| | || ||| || ||||| || | ||||||||||| ||||||||||| Sbjct 15729 CTTTTTCCCGA---CGGTCATAATCAGGTCGGCAAATTCGTCGACCATCACCACGATGTA 15785 Query 97305 GGG 97307 || Sbjct 15786 CGG 15788 >seq72351 Length=1439 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 97125 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 97184 ||| | ||| | |||||| || || || | ||||||||||| || ||||| |||||||| Sbjct 995 CGGAATGTTCGCTTTGATCAGACCGGTAATGACATCCACGGATGGACGCTGTGTCGCCAG 936 Query 97185 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT 97232 || ||||| || ||||| || || || ||||| || | |||| |||| Sbjct 935 TACCAGATGGATGCCGGCAGCACGGGCTTTCTGTGCCAGGCGGGCAAT 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351544023011930