Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq185146 302 4e-77 >seq185146 Length=13167 Score = 302 bits (334), Expect = 4e-77 Identities = 273/341 (80%), Gaps = 3/341 (1%) Strand=Plus/Minus Query 135698 CCATCATCACTTAGAAGATTACGAATTATTTCTAACCTATCCCTCATTAAGCCCAGCCAA 135757 ||||| ||||| || | ||||||||| || || || | ||| | ||| | | |||| Sbjct 8430 CCATCTTCACTGAGTAAATTACGAATAATCTCCAAGCGATCACGCATCAGAGTTAACCAA 8371 Query 135758 ATGGAATGCTCCAGGCTATCATCGTAGTGCTCAAAAGCCCTTCCGGTATTGAATGGTGGG 135817 | || ||||| | | ||| ||||| |||||||| || || || || || | ||||| Sbjct 8370 AGTGAGTGCTCAACCCCATCGTCGTAATGCTCAAAGGCACTGCCCGTGTTATAGGGTGGA 8311 Query 135818 TCGATGTAAACACACTTCACTTTGCCTGTATACTCTTGCTCTAGCGCCTTCAATGCTAAT 135877 ||||| ||||||||||||||||||||| ||| || |||||||| ||||||| || || Sbjct 8310 TCGATAAAAACACACTTCACTTTGCCTGCATATTCCTGCTCTAGTGCCTTCAGCGCCAAC 8251 Query 135878 AAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATCGTTTTCGGTCACTTTCTGGCT- 135936 | ||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct 8250 AGGTTGTCGCCAAAAATAAGCTTATTATCAAAAATATCTTTTTCGGTGACTTTTTGGCTA 8191 Query 135937 GC--GGTAAGACTTGCTCGAATCTTCTAACAAAATGTGCGGCTCTAGCTTTTTGCGCTCG 135994 || |||||||||| || | |||||| || |||||| ||||||| || |||||||||||| Sbjct 8190 GCAAGGTAAGACTTACTAGGATCTTCCAATAAAATGCGCGGCTCAAGTTTTTTGCGCTCG 8131 Query 135995 TTTTTACCTATCCAGGTAAGTTCTAATTTAGTTTTGCTCAT 136035 |||||||||||||| || ||||||||||| ||||||||||| Sbjct 8130 TTTTTACCTATCCAAGTCAGTTCTAATTTGGTTTTGCTCAT 8090 Score = 149 bits (164), Expect = 6e-31 Identities = 194/265 (73%), Gaps = 15/265 (6%) Strand=Plus/Minus Query 134701 TTGTACTCTTTATTGATCAG-----------ACTTATCTTTCGTAATTAAGGTCGGAGTA 134749 ||||||||||| ||||||| |||| ||||| ||||| | ||| | | Sbjct 9345 TTGTACTCTTTGTTGATCACTTCCAAGCCGAACTTGTCTTTAACGATTAAAGACGGTGCA 9286 Query 134750 AGTTTGTAATAGCGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGAAATACCCCCT 134809 ||||||||||| ||||| ||||| |||||||||||||| |||| ||||| | ||| ||| Sbjct 9285 AGTTTGTAATAACGGAAACCACCGCCACCTTGCCAGTTAACAGTTTTAGATACACCGCCT 9226 Query 134810 TGATCTTCACCATCGATCACTTTTTCCAAGCGCGG-AATAATATGGGTATGACAATG-AT 134867 |||||||||||||| || ||||||| || || || || | || | | |||||| || Sbjct 9225 TGATCTTCACCATCAATGACTTTTTGTAACCGGGGTAACACTA-CATTGTCACAATGCAT 9167 Query 134868 CACCTAGCTCGATTGAGATCCAACGTCTTTTCATCTTGTGAGCTACAGCAGCAGTAGTTC 134927 | |||||||| | ||||| || | |||||| |||||||| ||| | ||||| | Sbjct 9166 C-CCTAGCTCAACCATAATCCAGCGGCGCCCCATCTTATGAGCTACCGCACCTGTAGTGC 9108 Query 134928 CCGAACCACCGAATGAATCCAATAC 134952 | |||||| | || ||||| || || Sbjct 9107 CAGAACCAGCAAAAGAATCTAAAAC 9083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441960730616800