Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq497144 138 3e-28 seq136258 111 4e-20 seq153502 105 2e-18 >seq497144 Length=1636 Score = 138 bits (152), Expect = 3e-28 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 ||||| | ||| || ||||| ||||||||||||||||| ||| || || || ||| Sbjct 1417 ACCACAACTTCGGTGGTGTACTTCTCAACGCCAGCCTGGTCAGTCCATTTACGGGTCTGC 1358 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 || |||||||| || | |||| |||||| |||||||| | | ||| | ||| ||| Sbjct 1357 AGTGCGCCTTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCC 1298 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 ||||| ||||| | || |||||||||||||| ||||| ||||| | || || |||||| Sbjct 1297 AGCTTGCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGC 1238 Query 410 TTATCCTTCCAGGTTTCAGACGTGGC 435 || || ||||| ||| || || || Sbjct 1237 TTGTCGCGCCAGGATTCGGAGGTAGC 1212 >seq136258 Length=1331 Score = 111 bits (122), Expect = 4e-20 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 ||||||| ||| || ||||| || || |||| |||| |||||||| || || || || Sbjct 50 ACCACGACTTCGGTGGTGTAACGCTCCTGGCCACCCTGATCCTGCCATTTACGGGTGCGC 109 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 ||| |||||| || | |||| ||||| |||||| | | |||| ||| ||| Sbjct 110 AGCTGGCCTTCGATATAGACCTGCGACCCTTTTTTCAGGTATTCACCCGCGACTTCAGCC 169 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 || || || || | ||||| ||||||||||| || | ||||| || || || |||||| Sbjct 170 AGTTTGCCAAACAGAACCACACGGTGCCATTCAGTGATCTCTTTGTTTTCACCGGTCTGC 229 Query 410 TTATCCTTCCAGGTTTCAGACGTGGC 435 || || |||| |||| ||||| || Sbjct 230 TTGTCGCGCCAGCTTTCCGACGTAGC 255 >seq153502 Length=4143 Score = 105 bits (116), Expect = 2e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 || || | ||| || ||||| ||||| |||| | ||||| ||||| |||||||| || Sbjct 1956 ACAACCACTTCGGTGGTGTAACGATCTTGGCCACCTTGGTCTTGCCATTTGCGCGTACGC 2015 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 || ||||| || | |||| |||||| ||||| || | || || | |||||| Sbjct 2016 AGTTGACCTTCGATATAAACCTGAGAGCCTTTACGCAGATATTCGCCAGCAACTTCTGCT 2075 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 | || ||||| | || || ||||||||||| || | ||||| || || || || ||| Sbjct 2076 AATTTACCGAACAACACAACACGGTGCCATTCAGTAATCTCTTTATTTTCACCGGTTTGC 2135 Query 410 TTATCCTTCCAGGTTTCAGACGTGGC 435 ||||| |||| ||||||| || || Sbjct 2136 TTATCACGCCAGCTTTCAGAGGTTGC 2161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134598905549426