Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq1462 100 6e-16 >seq1462 Length=4781 Score = 100 bits (110), Expect = 6e-16 Identities = 329/502 (66%), Gaps = 16/502 (3%) Strand=Plus/Plus Query 24412 GGTATTAATATGGGCCGTATTCGTGCTCTAGACTCTGAGATTCGTTCAGGTGATGCAGTA 24471 ||||| ||| |||||||||||||| |||| | || ||| ||||| || | Sbjct 1180 GGTATCAATGCTGGCCGTATTCGTGCGCTAGGCAGCCCAATCCGTGGTGGTGAAGCTTTC 1239 Query 24472 CATACTGGGTTGATTCCTTTTATCGCAGCAACTGC-TAAGACCGTTAAAAGCTGCTCACA 24530 ||||| ||||| ||| || | | || | | | | |||| ||| ||||| || Sbjct 1240 CATAC-CGGTTGTATCCCGTTCTACAAACACTTCCAGACGGCCGTGAAATCTTGCTCGCA 1298 Query 24531 GGGTGGTGTGCGTGGTGGTGCAGC--AACTGTTCACTTCCCATTGTGGCATTTGGAGTTT 24588 || || || || || ||||| || |||||| | ||| ||||||| ||||| || Sbjct 1299 AGGCGGCGTACGCGGGGGTGCCGCGACACTGTT--TTACCCTATGTGGCACTTGGAAATT 1356 Query 24589 GATAACCTAGTAGTACTTAAAAATAACAAAGGTACAGAGTTTAACCGTGTACGTCAACTA 24648 || | | || |||| || ||||||||| ||| || ||||||||| ||||| ||| Sbjct 1357 GAAAGCTTATTAGTCCTGAAAAATAACCGTGGTGTTGAAGGTAACCGTGTCCGTCACCTA 1416 Query 24649 GACTATTGTTTCCAAGTAAACAAAACTTTATATCAACGTTTGGTTGATGGAAAGAACATT 24708 || || | | ||| | |||||| | ||||||||| |||| | || | || Sbjct 1417 GATTACGGCGTACAAATCAACAAACTCATGTATCAACGTCTGGTAAAAGGCGGCGATATC 1476 Query 24709 ACATTCTTTAGTCCTAATGAAGTTCCTGGGCTATATGAAGCATTCTGTTCTGACCaaaaa 24768 | | || ||||| || || || |||||||| || || |||| |||||||| | Sbjct 1477 TCGCTATTCAGTCCATCGGATGTGCCAGGGCTATACGATGCCTTCTTCGCTGACCAAGCA 1536 Query 24769 gaatttgaaaaactatataaaaaatacgaagctgaccaaagcatccgt----aaaaaaTC 24824 || |||||| || || | | |||||||| || | || ||| ||||||| Sbjct 1537 GAGTTTGAACGTCTTTACACTCAGTACGAAGCGGATGATTCTATTCGTAAGCAAAAAAT- 1595 Query 24825 CGTACCTGCTGTTGAAGTATTCAGCACT-CTAATGACTGAACGTGCAGAAACTGGTCGTA 24883 || || ||||| | || || || | ||| |||||||| ||||| |||| Sbjct 1596 --TA-AAGCCGTTGATCTGTT-TGCCCTAATGATGCAAGAACGTGCTTCGACTGGCCGTA 1651 Query 24884 TCTATATTCAAAATATTGACCA 24905 | ||||| ||||| ||||||| Sbjct 1652 TTTATATCCAAAACGTTGACCA 1673 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23667 CGTAACCAAGCGTAATGGAATGAAAGAGCCGTTATCA--TTGGATAAGATCCATCAAATT 23724 ||| || ||||| ||||| | |||| | ||||| ||||||||||| || | | | Sbjct 435 CGTGACTAAGCGCAATGGCCAGCAAGAACG--TATCAACTTGGATAAGATACACCGAGTA 492 Query 23725 TTATTTTTCGCTGCTGAAGGGTTAAGTGGTATTTCCGTTTCTGAAATTGAAATCCGTGCA 23784 | || |||||||| || |||| | | |||||||| || ||||| | || | Sbjct 493 CTTGATTGGGCTGCTGAGGGATTAAATAACGTCTCCGTTTCACAAGTTGAATTACGCTCT 552 Query 23785 CAGCTTCAGTTTTATGAAGGTATAGAAACCAGTACTATTCATGATATTCTAATAAAAGCA 23844 || | ||||||||||| || || | || | |||||||| | | | || ||||| Sbjct 553 CATATCCAGTTTTATGATGGCATCAAGACTTCTGACATTCATGAAACTATCATTAAAGCC 612 Query 23845 GCAGCAGAACTTATTTCTGAAGATACGCCGAACTATCAATACGTTGCTG 23893 ||||| || || ||||| ||| |||| ||||||||||| | |||| Sbjct 613 GCAGCGGATCTGATTTCGCGCGATGCGCCAGACTATCAATACCTCGCTG 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108038264954049