Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq260686 136 4e-27 seq1462 120 3e-22 >seq260686 Length=13603 Score = 136 bits (150), Expect = 4e-27 Identities = 286/424 (67%), Gaps = 2/424 (0%) Strand=Plus/Minus Query 26857 CAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTT 26916 |||||||| | |||||| ||| | ||| | |||||||| || |||| ||||||| Sbjct 5606 CAGGCGCTGATACATCAGCTTGTTCAGCTGCACGCCGTAGTCCATATGACGCACGCGGTT 5547 Query 26917 CTCTTCTGTTCCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAG-TGCCACA 26975 |||| || |||||||||||||| || | | | || | || || ||||||| Sbjct 5546 GCCTTCAACGCCGCGGTTGTTCTTCAGCACCAGCAGGCTTTCCA-CTTCCAGATGCCACA 5488 Query 26976 GAGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCG 27035 ||| | || ||||||||||||||||| | ||||||||||||||| ||||| | || Sbjct 5487 TTGGGTAGAACAGGGTCGCTGCACCGCCGCGCACGCCGCCCTGAGAGCAGGACTTCACCG 5428 Query 27036 CCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCGCCGCGAA 27095 | || | ||| |||||| || ||| || || | || |||||||| | Sbjct 5427 CGGTCTGGAAGTGCTTATAGAACGGAATGCAGCCGGTGTGGAATGCTTCACCGCCGCGGA 5368 Query 27096 TAGGACTACCAATACCACGGATTGCCCCGAAGTCAAAACCGATACCAGCGCGTTTGGACA 27155 | || || || | ||||||| ||| || || |||||||| || || | || | Sbjct 5367 TCGGGCTGCCCAGCGCACGGATGCGACCGGCGTTAATGCCGATACCGGCACGCTGAGAAA 5308 Query 27156 CATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGA 27215 | || | || || | ||| || ||||| || || || ||| |||| || || | Sbjct 5307 CGTACTTCACAATCGCGCTGGAGGTGGCGTTAATGGAATCAAGGCTGTCGCCGCACTCAA 5248 Query 27216 TCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTG 27275 ||| || || ||||||||||| || || || || || || |||| ||| || || || | Sbjct 5247 TCAGTACGCAGGAGCTGAACTGGCGCGTCGGGGTGCGCACGCCGGACATAATTGGCGTCG 5188 Query 27276 GAAG 27279 | || Sbjct 5187 GCAG 5184 >seq1462 Length=4781 Score = 120 bits (132), Expect = 3e-22 Identities = 282/423 (67%), Gaps = 2/423 (0%) Strand=Plus/Minus Query 26855 ACCAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGG 26914 ||||| || | | |||| | |||||| || | ||||| || | | |||| | ||| Sbjct 1460 ACCAGACGTTGATACATGAGTTTGTTGATTTGTACGCCGTAATCTAGGTGACGGACACGG 1401 Query 26915 TTCTCTTCTGTTCCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAGTGCCAC 26974 || |||| |||||||| || |||||||| | | | || | | |||||||| Sbjct 1400 TTACCTTCAACACCACGGTTATTTTTCAGGACTAATAAGCTTTCAATTTCCAAGTGCCAC 1341 Query 26975 AGAGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGC 27034 | |||| || |||||| ||||| ||||| | |||||| || ||||| || || | Sbjct 1340 ATAGGGTAAAACAGTGTCGCGGCACCCCCGCGTACGCCGCCTTGCGAGCAAGATTTCACG 1281 Query 27035 GCCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCGCCGCGA 27094 ||| || | ||| ||||||||| || ||||| | || || || || Sbjct 1280 GCCGTCTGGAAGTGTTTGTAGAACGGGATACAACCGGTATGGAAAGCTTCACCACCACGG 1221 Query 27095 ATAGGACTACCAATACCACGGATT-GCCCCGAAGTCAAAACCGATACCAGCGCGTTTGGA 27153 || || || || | |||| || | || | | | | | ||||| || ||||||| || Sbjct 1220 ATTGGGCTGCCTAGCGCACGAATACGGCCAGCATTGATA-CCGATCCCTGCGCGTTGTGA 1162 Query 27154 CACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTT 27213 || || | |||||| | | | || |||||||||||||| | | | || ||| || Sbjct 1161 AACGTATTTAACGATAGCACTAGAAGTGGCGTTGATAGAGTCTAAGCTATCGCCACACTC 1102 Query 27214 GATCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGT 27273 ||| | ||| ||||||||||| || || || || || || || || |||||||| || || Sbjct 1101 GATAAGCACGCATGAGCTGAATTGGCGAGTCGGCGTCCGTACCCCAGCCATGATTGGCGT 1042 Query 27274 TGG 27276 || Sbjct 1041 AGG 1039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493877919334960