Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_025466.1 Length=40161 Score E Sequences producing significant alignments: (Bits) Value seq150516 100 7e-17 >seq150516 Length=8092 Score = 100 bits (110), Expect = 7e-17 Identities = 447/690 (65%), Gaps = 30/690 (4%) Strand=Plus/Minus Query 6496 TCGTGGTGGCACACTTCAAAGCTTGCATGTTTCGGAGTTCGGAAAGATATGCAAAAAGTA 6555 |||||| ||||| || | | |||| ||||| ||||| || ||||||||| ||||| Sbjct 1730 TCGTGGCGGCACGCTGCGCTACCTGCACGTTTCCGAGTTTGGGAAGATATGCGCCAAGTA 1671 Query 6556 TCCAGAGAAAGCACAGGAGATTGTTACAGGTGCGTTTAACTCAGTAGGCAA--GAATGGC 6613 |||||| || || | |||||||| || ||||||||| | ||||| ||| | ||| Sbjct 1670 TCCAGATAAGGCCCGTGAGATTGTCACTGGTGCGTTTGAGGCAGTAT-CAACCGGATGCT 1612 Query 6614 ACGATAACAATCGAAAGTACCGCAGAGGGTA-AGCAGGGTTACTATTATGACTATTGCAC 6672 | | | ||||| || || |||||||| ||| |||||||| | || |||||| Sbjct 1611 TTGCGA-CTATCGAGAGCACGGCAGAGGGGCGAGC-GGGTTACTTCTTCGATTATTGCCA 1554 Query 6673 CATCGCCAAGAAGTTAAAAGACCAGGG---GCGCGAA--CCATCAGGAATGGAATTTAAA 6727 | || | ||| | ||||| || | || | ||| ||||| || Sbjct 1553 GACAGCTGAAAAGGCCTCATTGCAGGGCAAGCCCCTTTCCCCGCTGGACTGGAAGTTC-- 1496 Query 6728 TTTCATTTCTTCCCTTGGTGGAAAGATCCTGAATACTCACTAGAAGCTGGTGAGGTAT-- 6785 ||| |||||| |||||||||| |||| | ||| || | || | | || | || Sbjct 1495 -TTC--TTCTTCTCTTGGTGGAAGAATCCGCAGTACGCAATCGACCCGGTAGAAGCATTA 1439 Query 6786 -CTAATAGATTAATCGAATACTTTACTGACCTTGAATCAAAGCATGAT---ATTCATTTA 6841 | | | | | || ||||| ||| | ||| | ||||| | |||| | | Sbjct 1438 CCGCAGCGCCTGGTTGATTACTTCGATGAGATGGAAGCCAAGCACGGCGTAATTC--TCA 1381 Query 6842 ACTGATGGTCAAAAGCGATGGTATGCAGCAAAGGAGGCTACTCAAGGCGATGATATGAAG 6901 || || | || || ||||| || || ||| || | |||||||| |||||| Sbjct 1380 AC-GAGCGCCAGAAATCCTGGTACTACGCCAAAGAGAAAACGCTCGGCGATGACATGAAG 1322 Query 6902 CGTGAGTATCCATCTACACCAGAAGAATCATTTGCACAGGCTATCGATGGCGCTTACTAC 6961 ||||||||||| | | || | || |||| || | |||| |||||||||||| Sbjct 1321 CGTGAGTATCCGACGATGCCTGCTGAGGCATTCCAGCAATCAGTCGAAGGCGCTTACTAC 1262 Query 6962 GCCAAACAGTTT-GCTAAGATATACGAAGAAAAACGCATAGGAGAAATGCCAGCTAA-TG 7019 ||||| ||||| ||| | | ||| | |||||||| || |||| | ||| | Sbjct 1261 GCCAAGCAGTTCCGCTG-GCTCTACACCAACAAACGCATTGGCACGCTGCCTGATAACTC 1203 Query 7020 ACGCA--CCAGTTAACACAGCTTGGGATATTGGTGTAGGTGACTCATCATCAATCTGGTT 7077 || | || ||| |||| |||||||| || || ||||||||| | | |||||||| Sbjct 1202 ACACCTGCCGGTTCACACGTTCTGGGATATAGGCGTGGGTGACTCAACGGCCATCTGGTT 1143 Query 7078 TTGGCAGAATATCGGCGGCAAAATACACATTGTTGATTATTACGAAAACAGCGGCGAAGG 7137 || | | |||| || | ||||| | || |||||||||||| || ||||| Sbjct 1142 CGTGCGTGAAGTGGGCGAAGAATTCCACATCATCGACTATTACGAAAACTCAGGTGAAGG 1083 Query 7138 TATGCGCCATTACTTTAAGGTATTAAAAGA 7167 |||| || ||| | ||||| | ||||| Sbjct 1082 CCTGCGTCACTACATGAAGGTGCTGAAAGA 1053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127632450721046