Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq416309 107 2e-18 seq497701 86.0 6e-12 >seq416309 Length=254 Score = 107 bits (118), Expect = 2e-18 Identities = 175/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 47029 TCCTGAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGC 47088 ||| |||||| | | ||||| |||| |||||| ||||||| | | | || |||| Sbjct 253 TCCAGAGCATCATCACCGAGGCTGTGACCATCGAGCAGGAGTTCCTCTCCGACGCTCTGC 194 Query 47089 CCGTCGCCTTGCTGGGCATGAACGCACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCG 47147 | ||| |||| ||||||||||| || || |||||| | || |||||||| || || Sbjct 193 CTTGTGCCCTGCTCGGCATGAACGC-CAACCTCATGTGCCAGTACATTGAGTTCGTCGCC 135 Query 47148 GATCGTCTGTTGGT-GCAGCTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTG 47205 || |||||| | | ||| ||||| |||| ||| | | ||||| || || || | Sbjct 134 GACCGTCTGCTCCTCGCA-CTCGG-CAACAAGAAGTTCTACAATGCCACCAACCCCTTCG 77 Query 47206 AGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAG 47265 | || ||| | ||||| || |||| ||||| ||||| || |||||||| || ||||| | Sbjct 76 ACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCG 17 Query 47266 AGTA 47269 |||| Sbjct 16 AGTA 13 >seq497701 Length=1919 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||| | ||||| || | | | ||||| || || ||||||||||| || || Sbjct 364 ACGCAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGAGT 305 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || ||||| || |||| | |||| || ||||| || || ||||| ||||| Sbjct 304 GCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCC 245 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || ||| |||| | || | || || | | |||||| || | Sbjct 244 CTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAG 185 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || || || ||||| || || | ||| |||||||| Sbjct 184 CGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473637021001560