Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq259146 114 5e-21 seq11972 114 5e-21 >seq259146 Length=2880 Score = 114 bits (126), Expect = 5e-21 Identities = 158/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 59928 TCGAGTCACCCGAGATCCACCTGAGCGCAC-AGTTTCTCGACGTTGACGGCCCACGCAAG 59986 |||| ||||||||| ||||| || || |||| || ||| | | |||||||| ||| Sbjct 1775 TCGATTCACCCGAGCCGCACCTC-GCTTACCAGTTCCTTGACCTGGCTGGCCCACGTAAG 1833 Query 59987 CTCAACGACATCACCGTGCTGTACGACGACGGCCAGCACCAAGCGTGGTCCGGACAGCGC 60046 || || ||| || |||| |||||| | |||| ||||| || | |||||||||| Sbjct 1834 CTTAAAGACCTCGCCGTACTGTACCAGGACGATAAGCACATCGCTTACACCGGACAGCGA 1893 Query 60047 GGC-TACTGCCTCTACTACCACCGATCCGCTATCGACGCGGTCGGAGGCTTCGACCCGAT 60105 ||| | ||| | ||||||||||| || || || || ||| || |||||||||||| | Sbjct 1894 GGCGTGATGCTT-TACTACCACCGCTCAGCGATTGAGAAGGTTGGCGGCTTCGACCCGGT 1952 Query 60106 CTACAGCCCCGGACTCTACGAGCACTCCGACCTGGC 60141 ||| | | ||| | ||||| ||||| |||||||| Sbjct 1953 TTACGGGCGCGGCATGTACGAACACTCTGACCTGGC 1988 >seq11972 Length=3077 Score = 114 bits (126), Expect = 5e-21 Identities = 158/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 59928 TCGAGTCACCCGAGATCCACCTGAGCGCAC-AGTTTCTCGACGTTGACGGCCCACGCAAG 59986 |||| ||||||||| ||||| || || |||| || ||| | | |||||||| ||| Sbjct 1972 TCGATTCACCCGAGCCGCACCTC-GCTTACCAGTTCCTTGACCTGGCTGGCCCACGTAAG 2030 Query 59987 CTCAACGACATCACCGTGCTGTACGACGACGGCCAGCACCAAGCGTGGTCCGGACAGCGC 60046 || || ||| || |||| |||||| | |||| ||||| || | |||||||||| Sbjct 2031 CTTAAAGACCTCGCCGTACTGTACCAGGACGATAAGCACATCGCTTACACCGGACAGCGA 2090 Query 60047 GGC-TACTGCCTCTACTACCACCGATCCGCTATCGACGCGGTCGGAGGCTTCGACCCGAT 60105 ||| | ||| | ||||||||||| || || || || ||| || |||||||||||| | Sbjct 2091 GGCGTGATGCTT-TACTACCACCGCTCAGCGATTGAGAAGGTTGGCGGCTTCGACCCGGT 2149 Query 60106 CTACAGCCCCGGACTCTACGAGCACTCCGACCTGGC 60141 ||| | | ||| | ||||| ||||| |||||||| Sbjct 2150 TTACGGGCGCGGCATGTACGAACACTCTGACCTGGC 2185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201311670465395