Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_027356.1 Length=108065 Score E Sequences producing significant alignments: (Bits) Value seq79071 123 2e-23 seq213894 105 5e-18 >seq79071 Length=852 Score = 123 bits (136), Expect = 2e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 24589 AGTAAATGTACGACTAATAACATCGTTCTGCTGTTCACGCGTCAGTGCGTTAAAACGTAC 24648 |||||| ||||| |||| || ||| |||||| ||| ||||||||| ||||||||| || Sbjct 193 AGTAAAGGTACGGGTAATTACGTCGCGCTGCTGCTCAGGCGTCAGTGAGTTAAAACGCAC 252 Query 24649 AGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATGTTTCTGTGCATC 24708 || || ||||||||||||||||| | || || || |||||||||||||| |||||| Sbjct 253 GGCATAGCCTGAAACACGGATAGTCAGCTGCGGATAGTTTTCAGGATGTTTAACTGCATC 312 Query 24709 CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCCCCTTCAA 24761 ||| || |||| | || ||||| || || || || || ||||||| Sbjct 313 TTCCAGCGTTTCGCGACGCAGAACGTTGACGTTCAGATGCTGTCCACCTTCAA 365 >seq213894 Length=28734 Score = 105 bits (116), Expect = 5e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 24577 TTACATCGCCTGAGTAAATGTACGACTAATAACATCGTTCTGCTGTTCACGCGTCAGTGC 24636 |||||| |||||| || ||||| | || ||||| | ||||||||| ||||| | Sbjct 8989 TTACATGCTCTGAGTGAAGGTACGGGTGATCACATCCTGCTGCTGTTCTTTAGTCAGCGA 8930 Query 24637 GTTAAAACGTACAGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGATG 24696 ||| || ||||| || || || || || || || ||||| || || |||||||| || | Sbjct 8929 GTTGAAGCGTACCGCATAGCCCGACACGCGAATGGTTAACTGCGGATATTTTTCCGGGTC 8870 Query 24697 TTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCCCC 24756 || | || |||| ||| ||||| | | ||| ||||| || ||||| |||||||| Sbjct 8869 TTCCATCGCTTCCAGCAGCATTTCACGGTTCATCACGTTGACGTTGAGGTGCTGACCCCC 8810 Query 24757 TTCAAT 24762 |||||| Sbjct 8809 TTCAAT 8804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343579974937906