Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_027360.1 Length=87603 Score E Sequences producing significant alignments: (Bits) Value seq255299 91.5 8e-14 seq366053 89.7 3e-13 >seq255299 Length=12406 Score = 91.5 bits (100), Expect = 8e-14 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 2345 TTGGCACACCCTACAGGATTCGAACCTGTAACTAACGATTTAGAAGACCGTTGCTCTATC 2404 |||| || ||||||||||||||||||||| || ||| ||||||| ||| ||||||||| Sbjct 3293 TTGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATC 3352 Query 2405 CAATTGAACTAAGGGTGCAT 2424 ||| ||| ||||||| |||| Sbjct 3353 CAACTGAGCTAAGGGCGCAT 3372 >seq366053 Length=223 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 2346 TGGCACACCCTACAGGATTCGAACCTGTAACTAACGATTTAGAAGACCGTTGCTCTATCC 2405 ||| || ||||||||||||||||||||| || ||| ||||||| ||| |||||||||| Sbjct 223 TGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCC 164 Query 2406 AATTGAACTAAGGGTGCAT 2424 || ||| ||||||| |||| Sbjct 163 AACTGAGCTAAGGGCGCAT 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278499962281884