Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq159964 158 3e-34 >seq159964 Length=5345 Score = 158 bits (174), Expect = 3e-34 Identities = 343/509 (67%), Gaps = 6/509 (1%) Strand=Plus/Plus Query 15315 AGGTCACAGCCACCCTTGGCGGCATCTTCAATCGTGACCACATAACGCCACTGCTTATCC 15374 |||| | |||| |||||| || ||||||| || | || ||||||||||| ||| Sbjct 463 AGGTTAAAGCCGCCCTTGATCGCGTCTTCAAGGGTAATGACGTAACGCCACTGGCCATCT 522 Query 15375 GGGCAAAGGCGACCGCCATCGCGCAGTTCATCAAACGTTGGGAACTCGATGTTCTTGCGT 15434 || || || || ||||| || |||||||| || | ||||| | | | || Sbjct 523 GGACACAGCCGCCCGCCGTCACGCAGTTCGCTGAATTTCGGGAAGGTGGTCGCCGCACGC 582 Query 15435 CGTTCGCTGCCATCGCGCCATTTGTCCCCAGTCCAGAACGGGTAAGCGGGGTGCATTTTG 15494 || |||||| ||| | ||||| ||||||||||| || || |||| ||||| Sbjct 583 TTTTTGCTGCCGAGCTTCCACTCTTCCCCGGTCCAGAACGGATAGGCCTGGTGGGTTTTG 642 Query 15495 GTTGAAGGGGTGGAAAAGTACGTCTTGCGCCACTTCTTATGCGTGGCCATCGCTGAGGCG 15554 | || || |||||||||||||| ||||||| || | ||||||||||| || ||| Sbjct 643 GCCGATGGCGTGGAAAAGTACGTGGTGCGCCATTTATCGTGCGTGGCCATGGCGCTGGCC 702 Query 15555 ACTTTGTTCAGCTCGT-CAAACTTGCCGATCCAGAAATACTCATCCACATACACATGGCC 15613 |||| |||||| ||| |||| || | ||||||||| ||||| |||| ||| || Sbjct 703 ACTTCGTTCAG-GCGTGCAAAGTTCGGCACCCAGAAATATTCATCGCAGTACAGATGCCC 761 Query 15614 GTGGTAACTCTGCGCTGTTTTGCCATTGGTAGACAGGAAATGCAGCTCAGCGCCATTAGA 15673 | ||| |||||| || || || || |||||||| |||| || || || || Sbjct 762 GCTGTAGGACTGCGCGGTGTTTTTGTTAGTGGACAGGAAGCGCAGTTCCGCACCGTTGCT 821 Query 15674 AAGCGTCATCGGGTTGCCGGAAAGTTCCAGCCCCAAAAACTCTTTGGCGAGCGAAACAAT 15733 ||| || || || || | || | || ||| ||| | |||| ||||| Sbjct 822 CAGCCGGATAGGATTACCCGTCAGCGTGATGCCAAAATACTGCTCCGCGATGTTCACAAT 881 Query 15734 ATAGCGGCGGAACACTTCGGCCTGAGCGCGTGA--AGCAGAGAGGAAAATCTGGTTGTCG 15791 || ||||||||| || |||| |||| | | ||||| || |||||||| |||| Sbjct 882 GTACGAGCGGAACACCTCCGCCT--GCGCCTTACTCGCAGAAAGAAAAATCTGCGGGTCG 939 Query 15792 CCAGTGAGAATCGCATTCTCTAGCGCTTC 15820 || || || | |||||||| | |||||| Sbjct 940 CCCGTCAGTACGGCATTCTCAAACGCTTC 968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107486990251580