Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq205071 114 1e-20 seq141175 105 6e-18 seq212072 102 7e-17 seq189152 96.9 3e-15 seq497701 89.7 4e-13 seq175940 89.7 4e-13 seq126136 86.0 5e-12 seq39020 86.0 5e-12 seq70284 84.2 2e-11 >seq205071 Length=52228 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | |||| || | || || || || || || ||||||||| Sbjct 3930 GCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 3871 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | |||| |||| |||||||| ||||||||| | ||||| ||||| || |||||||| Sbjct 3870 GAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 3811 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| || | | | || | ||||| | || || || Sbjct 3810 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCAC 3751 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||||||||| || ||||| ||||| ||||| Sbjct 3750 CTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 3703 >seq141175 Length=38247 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | ||||| || | || || || || || || |||||||| Sbjct 26382 GCCACCACGCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC 26323 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | |||| | || || ||||| || |||||| | ||||||||||| || ||||| || Sbjct 26322 AAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 26263 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| |||| | || | ||||||| || ||||| Sbjct 26262 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGGACTCAAC 26203 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || || || |||||||||||||| Sbjct 26202 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 26155 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || |||||||| | | |||| | || || Sbjct 25907 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCA 25848 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | |||||| || || | Sbjct 25847 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGG 25788 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | || | ||||| | || ||||| || || || || | ||| Sbjct 25787 ATCTTGGCCTTCACATTATCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 25728 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || |||||||| || ||||| Sbjct 25727 CCGGTGAGGGTCTTCACAAATATCTGCAT 25699 >seq212072 Length=212802 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | |||| || | ||| || || ||||| | ||||||||| Sbjct 87508 TGCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTTTGCACGTTGTAGTCGG 87567 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | |||| |||| |||||||| || |||||| | ||||| ||||| || ||||||| Sbjct 87568 CGAGCGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 87627 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||||||| || | | | || | ||||| || || | Sbjct 87628 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCA 87687 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||||||||| || || || ||||| ||||| Sbjct 87688 CCTCCAGCGTGATTGTCTTGCCCGTCAGGGTCTTTACGAAGATCTGCAT 87736 >seq189152 Length=79535 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCT 27102 ||| || ||||| || || ||||| ||||| || || |||| ||| | || || |||| Sbjct 37570 ATGAAAAGTAGACTCCTTCTGAATGTTGTAATCAGCCAATGTA-CGCCCATCCTCAAGCT 37628 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 | || || ||| | ||||| | ||||||||| || || | |||||| || || ||||| Sbjct 37629 GCTTGCCAGCGAAGATGAGCCTCTGTTGATCTGGTGGGATACCCTCCTTGTCCTGGATCT 37688 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 | || | | || | ||| | | ||||| ||||||||||| | || || | Sbjct 37689 TTGCCTTGACATTGTCGATGGTGCCCGAACTCTCAACCTCTAGAGTTATGGTCTTCCCGG 37748 Query 27223 TCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||||||||||||||| ||||| Sbjct 37749 TAAGAGTTTTCACAAAGATCTGCAT 37773 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||||||||| || || ||||||| || |||||||| || || Sbjct 37349 GTAGACTCCTTCTGAATATTGTAATCTGCCAAAGTGCGCTCATCCTCGAGCTGCTTTCCA 37408 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| | ||| || || ||||| | ||| |||||||| |||||| ||| Sbjct 37409 GCAAAGATGAGCCTCTGCTGGTCAGGCGGGATACCTTCTTTATCCTGGATCTTAGCCTTC 37468 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||||| ||||| || | || || || || || Sbjct 37469 ACATTATCAATGGTGTCGGAGCTCTCAACTTCAAGAGTGATGGTCTTTCCGGTTAGTGTC 37528 Query 27231 TTCACAAAGATTTGCAT 27247 || ||||| || ||||| Sbjct 37529 TTGACAAATATCTGCAT 37545 >seq497701 Length=1919 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| || | |||| || | ||||| || || || || |||||||| Sbjct 370 GCCACCACGCAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGC 311 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || |||| | || || ||||| || ||||| | ||||| ||||| || ||||| || Sbjct 310 CAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGG 251 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| |||| | | || | ||||| | || || || Sbjct 250 GATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 191 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||||||||| || || || ||||| |||||| Sbjct 190 CTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATA 142 >seq175940 Length=99262 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || ||||| || | |||| || | || || || || || || |||||||| Sbjct 57468 TGCCACCACGCAAGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 57409 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | |||| |||| || ||||| || || ||| | ||||| ||||| || ||||| | Sbjct 57408 CAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAG 57349 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| || | | | || | ||||| | || || | Sbjct 57348 GGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGA 57289 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | ||||| || || || ||||||||||| ||||| Sbjct 57288 CCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 57240 >seq126136 Length=5165 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || | |||||| || | |||| | || |||||||| || || Sbjct 2542 GTGGACTCCTTCTGGATGTCGTAGTCAGCCAGGGTGCGACCATCCTCGAGCTGCTTGCCA 2483 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | |||||| |||| || ||||| || | |||||| ||||| |||||| || Sbjct 2482 GCAAAGATGAGATGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGATCTTAGCCTTG 2423 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || || ||||| | || || || || || || || | ||||| || || | Sbjct 2422 ACGTTGTCGACGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGATC 2363 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 2362 TTCACAAAGATCTGCAT 2346 >seq39020 Length=39705 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || || ||||| || | |||| | || || ||||| ||||| Sbjct 16068 GTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCA 16127 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||||| || || |||||| || Sbjct 16128 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 16187 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || ||||| || || || || | ||||| || || || Sbjct 16188 ACGTTGTCGATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 16247 Query 27231 TTCACAAAGATTTGCAT 27247 |||||||| || ||||| Sbjct 16248 TTCACAAAAATCTGCAT 16264 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| | | |||| | || |||||||| || || Sbjct 16296 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 16355 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||||| || || ||| ||| || Sbjct 16356 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTG 16415 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | || || || || || || || | ||||| || || || Sbjct 16416 ACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 16475 Query 27231 TTCACAAAGATTTGCAT 27247 |||||||| || ||||| Sbjct 16476 TTCACAAAAATCTGCAT 16492 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || || ||||| || | |||| | || || Sbjct 15600 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCCGCCAGGGTGCGGCCATCCTCA 15659 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| ||| | || || ||||| || ||||| || | ||||| || || | Sbjct 15660 AGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 15719 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | || | ||||| | || ||||| || ||||| || | ||| Sbjct 15720 ATTTTCGCCTTCACATTGTCAATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTG 15779 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || |||||||||||||| Sbjct 15780 CCGGTGAGGGTCTTGACAAAGATTTGCAT 15808 >seq70284 Length=100422 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || |||| |||| || | || | || || || || || || |||||||| Sbjct 36125 TGCCACCACGCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 36184 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | | || | || || ||||| || || ||| | ||||||||||| || ||||| | Sbjct 36185 CAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 36244 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || ||||||| || | | | || | ||||| | | || | Sbjct 36245 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 36304 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| || | ||||| || || || ||||||||||| ||||| Sbjct 36305 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 36353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422348990353752