Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq49304 244 1e-59 seq255299 95.1 1e-14 seq366053 93.3 4e-14 >seq49304 Length=33242 Score = 244 bits (270), Expect = 1e-59 Identities = 213/265 (80%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAA 58136 ||||| |||||||||| ||||||||||||||||||||||| ||||| | || ||||| | Sbjct 27598 GCACGTTACAGCTGATCAAAGAACACGGCTGTAAAGCGGGCCTGGTGCTGAATCCGGCCA 27657 Query 58137 CGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCG 58196 |||||||||| ||| ||||| || ||||| || || |||||||||||||||||||| | Sbjct 27658 CGCCGCTCAGCATTCTGGATTATGTGATGGATAAGCTTGATGTGATCCTGCTGATGTCGG 27717 Query 58197 TGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAG 58256 | ||||| || || ||||||||||| |||||||| |||||| | |||||||| | | Sbjct 27718 TTAACCCCGGGTTTGGCGGCCAGTCGTTTATTCCCGGCACGCTGAACAAACTGCGTCAGG 27777 Query 58257 TGCGTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGA 58316 ||||| | || || | ||| ||||||||||| |||||||||||||||||||| | Sbjct 27778 TGCGTAAACTTATCGACCAGAGCGGCTACGACATTCGTCTGGAAGTGGACGGCGGCGTCA 27837 Query 58317 AGGTGAACAATATCGGCGAGATCGC 58341 | || |||| || |||| |||||| Sbjct 27838 AAGTCGACAACATTGGCGCGATCGC 27862 >seq255299 Length=12406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 59615 ATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTCG 59674 |||| ||||||| ||| |||||||||||| ||| ||||||| ||| || ||||||||| Sbjct 3372 ATGCGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 3313 Query 59675 AATCCTGTAGGGTGTACCAA 59694 |||||||||||| ||||||| Sbjct 3312 AATCCTGTAGGGCGTACCAA 3293 >seq366053 Length=223 Score = 93.3 bits (102), Expect = 4e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 59615 ATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTCG 59674 |||| ||||||| ||| |||||||||||| ||| ||||||| ||| || ||||||||| Sbjct 145 ATGCGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 204 Query 59675 AATCCTGTAGGGTGTACCA 59693 |||||||||||| |||||| Sbjct 205 AATCCTGTAGGGCGTACCA 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468300928715080