Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq121512 165 9e-36 seq77726 113 5e-20 seq279354 89.7 6e-13 seq112508 89.7 6e-13 seq21974 89.7 6e-13 seq244419 87.8 2e-12 seq161649 87.8 2e-12 seq247227 86.0 7e-12 seq204427 86.0 7e-12 seq203661 86.0 7e-12 seq190417 86.0 7e-12 seq182759 86.0 7e-12 seq95906 86.0 7e-12 seq82103 86.0 7e-12 seq53525 86.0 7e-12 seq14790 86.0 7e-12 seq202179 82.4 8e-11 >seq121512 Length=219671 Score = 165 bits (182), Expect = 9e-36 Identities = 499/754 (66%), Gaps = 24/754 (3%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || || ||||| ||||| || || ||||||||||| || | || ||||||| ||||||| Sbjct 212589 TACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATGAGCTCCATC 212648 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTGCCATGAG---G 74579 |||||||| ||||| | || ||| | |||||| | | | |||||||| | Sbjct 212649 CAGTCGAACGGGTTGGTGGCGTTGTACA---GCTTCTTGCAGCCCAGCGCCATGAGCAGG 212705 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || || || || || | |||||||| |||| | | | |||||||| ||| | Sbjct 212706 CGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGCGCG 212765 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATCT 74697 || || || || ||| || ||||| ||||| | || || | || | ||||| |||| Sbjct 212766 CAGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTC-CACGGCC-TCGGACACGATCT 212823 Query 74698 TGTGAATGTCTTTGGAAGGG--CACTTTTCC-CTCAGGTGAGAGTAAAGC-GTCACGGCA 74753 | | | | ||| | || || || | ||| ||| || | || ||| Sbjct 212824 CG---AAGACGCGGGACTCGTCCAGCTTGCCGCGGAGGATGTCGTAGAGGAGGCA-GGCG 212879 Query 74754 AACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGC 74813 || || ||| ||| || || | | || | || || || || | ||||| ||| Sbjct 212880 AAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGC 212939 Query 74814 ATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCT 74873 || || || |||||||| | ||| |||||||| |||||||| || |||||||||||| Sbjct 212940 ATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCC 212999 Query 74874 TCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA-CGGTGCATCGGAAGTC-ATCCAAG 74931 ||||| || || |||||||| | ||| | |||||| || | | | | ||| ||||| Sbjct 213000 TCGACGCAGGCGAAGGCGACGATGCGCTCCGCGAAGCGCTCC--CCGCCGTCGATCCAGC 213057 Query 74932 TCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGC 74991 | ||||| || || || || || || |||| || ||||| || ||||||||| Sbjct 213058 GGAGCGCCCAGTCGGCCTTGCGGCGCACGGCGGGGATGGTGTCGATGGCGCGGAAGAGGC 213117 Query 74992 TTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAAT 75051 ||||||| || || || | | || || | || |||||| |||| || | Sbjct 213118 GGTCCTTCTCGACGTCGTCGCGGATGTAGGTCTCGATGAGCAGGGAGTACATCTCGGAGT 213177 Query 75052 GAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACA 75110 | || |||| || ||| |||| | ||||||| | || ||||| || | ||| || Sbjct 213178 GGATGTTCTCGATG-GCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGCACG 213236 Query 75111 TCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAA 75170 || || | | ||| ||||| | ||||||||||||||||||||||| || Sbjct 213237 TCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCCGAGGCGGCGAAGAAG 213296 Query 75171 GCCAGTACCATTTTGATAAAGTGGCGCTCATCGT 75204 || || || ||| ||||||||||| |||| Sbjct 213297 GCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGT 213330 >seq77726 Length=20440 Score = 113 bits (124), Expect = 5e-20 Identities = 226/329 (69%), Gaps = 11/329 (3%) Strand=Plus/Minus Query 158968 CCAGTCGCAATCACAAAGTCCTCTGG---ACCGGGCTGTTGGAGCATGAGCCACATGGCC 159024 || || ||||||||| | |||||||| | | ||||| || | |||||||||| Sbjct 12882 CCTGTAGCAATCACATAATCCTCTGGCTTATCTTGCTGTAAGATCC---GCCACATGGCT 12826 Query 159025 TCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCATCCATGTTCCCGAGCTCGATG 159084 || || ||||| | || || ||||||||||| ||||| ||| ||||| | | | Sbjct 12825 TCTACATAATCTTTTGCATGCCCCCAGTCGCGTAAGGCATTCATATTCCCTAAATAAAGA 12766 Query 159085 -ACTTTTCCAGACTTTTTCCACTCAGCC--AG-ACCGAGCGTGATCTTGCGCGTCACAAA 159140 ||| || | | | || | |||| || | | | ||||| || || |||||||| Sbjct 12765 CACTCTTGCTTGCCTAAAGCAAT-AGCCGCAGTAGCCATTGTGATTTTACGTGTCACAAA 12707 Query 159141 CTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAATGCCGGTACAAGCGAACAGGTT 159200 | | || || || ||||||||||||||||| || || ||||||| ||| || Sbjct 12706 GGTTTCGCCACGACGAGGTGACTCATGGTTAAACAGGATACCATTACAAGCATACATATT 12647 Query 159201 ATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAAAGAGCTTGGAGACGCCGTATGG 159260 || | ||||||||||| || || ||||| ||||| ||| ||||| || ||||| || Sbjct 12646 GTACGCTTCGCGGTAATTCTTCGTAATCCAAAATCCATAGATCTTGGCTACACCGTAAGG 12587 Query 159261 ACTCCGAGGATAAAATGGTGTCCCCTCAT 159289 | ||||| ||||| || | | ||||| Sbjct 12586 AGAGCGAGGGTAAAAAGGGGAACTCTCAT 12558 >seq279354 Length=76790 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 79623 ACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCA 79681 ||||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||| Sbjct 69916 ACTGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCA 69975 Query 79682 ATTGAGCTACGAAAGC 79697 | ||||||| |||||| Sbjct 69976 ACTGAGCTATGAAAGC 69991 >seq112508 Length=149591 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 25571 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 25630 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 25631 TGAGCTATGAAAGCAA 25646 >seq21974 Length=194537 Score = 89.7 bits (98), Expect = 6e-13 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 79621 AGACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-AC 79679 ||| ||||||| |||| |||| |||| ||||||||||||||||||||||||||| || Sbjct 12259 AGAATGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAAC 12318 Query 79680 CAATTGAGCTACGAAAGCA 79698 ||| ||||||| ||||||| Sbjct 12319 CAACTGAGCTATGAAAGCA 12337 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 12746 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 12805 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 12806 TGAGCTATGAAAGC 12819 >seq244419 Length=215748 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 175568 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 175627 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 175628 TGAGCTATGAAAGCA 175642 >seq161649 Length=75863 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 79621 AGACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-AC 79679 ||| ||||||| |||| |||| |||| ||||||||||||||||||||||||||| || Sbjct 23947 AGATTGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAAC 23888 Query 79680 CAATTGAGCTACGAAAGC 79697 ||| ||||||| |||||| Sbjct 23887 CAACTGAGCTATGAAAGC 23870 >seq247227 Length=134214 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 45063 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 45004 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 45003 TGAGCTATGAAAGC 44990 >seq204427 Length=139080 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 58621 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 58680 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 58681 TGAGCTATGAAAGC 58694 >seq203661 Length=77445 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 19087 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 19028 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 19027 TGAGCTATGAAAGC 19014 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 21503 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 21444 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 21443 TGAGCTATGAAAGC 21430 >seq190417 Length=85877 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 26412 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 26471 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 26472 TGAGCTATGAAAGC 26485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 79623 ACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCA 79681 ||||||||| |||| |||| |||| ||||||||||||||||||||||||||| |||| Sbjct 25235 ACTGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCA 25294 Query 79682 ATTGAGCTACGAAAGC 79697 | || |||| |||||| Sbjct 25295 ACTGGGCTATGAAAGC 25310 >seq182759 Length=27492 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 18293 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 18352 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 18353 TGAGCTATGAAAGC 18366 >seq95906 Length=42846 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 10262 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 10321 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 10322 TGAGCTATGAAAGC 10335 >seq82103 Length=99881 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 58675 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 58734 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 58735 TGAGCTATGAAAGC 58748 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 59942 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 60001 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 60002 TGAGCTATGAAAGC 60015 >seq53525 Length=139491 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 138161 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 138102 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 138101 TGAGCTACGAGAGC 138088 >seq14790 Length=62806 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 38424 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 38483 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 38484 TGAGCTATGAAAGC 38497 >seq202179 Length=141280 Score = 82.4 bits (90), Expect = 8e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 119077 GAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCA-CGCGCTGCTCCT 119135 ||| | |||||| |||||||| ||||| ||||||| || ||||| | || |||| | Sbjct 75540 GAAGATGTTGGCGAGCTTGGCGCCGTAGCCGTTCCTGCCGCCGGTGGTCTTGC-GCTCGT 75482 Query 119136 CGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGG 119184 ||||| ||||||| |||||| | ||||| || |||||||||||||| Sbjct 75481 TGTCGTCGTAGTTGCTGCTGGTGAGGAGGTGGCCGAAGATGAGCTCGGG 75433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543801228515800