Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028248.1 Length=136896 Score E Sequences producing significant alignments: (Bits) Value seq185146 298 5e-76 >seq185146 Length=13167 Score = 298 bits (330), Expect = 5e-76 Identities = 271/341 (79%), Gaps = 3/341 (1%) Strand=Plus/Minus Query 30682 CCATCATCACTTAGAAGATTACGAATTATTTCTAACCTATCCCTCATTAAGCCCAGCCAA 30741 ||||| ||||| || | ||||||||| || || || | ||| | ||| | | |||| Sbjct 8430 CCATCTTCACTGAGTAAATTACGAATAATCTCCAAGCGATCACGCATCAGAGTTAACCAA 8371 Query 30742 ATGGAATGCTCCAGGCTATCATCGTAATGCTCAAAAGCCCTCCCGGTATTGAATGGTGGG 30801 | || ||||| | | ||| |||||||||||||| || || || || || | ||||| Sbjct 8370 AGTGAGTGCTCAACCCCATCGTCGTAATGCTCAAAGGCACTGCCCGTGTTATAGGGTGGA 8311 Query 30802 TCTATGTAAACACACTTCACTTTGCCTGCATACTCTTGCTCTAGCGCCTTCAATGCTAAT 30861 || || ||||||||||||||||||||||||| || |||||||| ||||||| || || Sbjct 8310 TCGATAAAAACACACTTCACTTTGCCTGCATATTCCTGCTCTAGTGCCTTCAGCGCCAAC 8251 Query 30862 AAGTTATCTCCAAAAATCAGTTTATTATCAAAAATATCGTTTTCGGTCACTTTCTGGCT- 30920 | ||| || |||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct 8250 AGGTTGTCGCCAAAAATAAGCTTATTATCAAAAATATCTTTTTCGGTGACTTTTTGGCTA 8191 Query 30921 --GTGGTAAGATTTGCTAGAATCTTCTAACAAAATGTGTGGCTCTAACTTTTTGCGCTCG 30978 ||||||| || |||| |||||| || |||||| | ||||| | |||||||||||| Sbjct 8190 GCAAGGTAAGACTTACTAGGATCTTCCAATAAAATGCGCGGCTCAAGTTTTTTGCGCTCG 8131 Query 30979 TTTTTACCTATCCAGGTAAGTTCTAATTTGGTTTTGCTCAT 31019 |||||||||||||| || ||||||||||||||||||||||| Sbjct 8130 TTTTTACCTATCCAAGTCAGTTCTAATTTGGTTTTGCTCAT 8090 Score = 163 bits (180), Expect = 2e-35 Identities = 197/265 (74%), Gaps = 15/265 (6%) Strand=Plus/Minus Query 29685 TTGTACTCTTTATTGATCAG-----------ACTTATCTTTCGCAACTAAGGCCGGGGCA 29733 ||||||||||| ||||||| |||| ||||| | | ||| | ||| ||| Sbjct 9345 TTGTACTCTTTGTTGATCACTTCCAAGCCGAACTTGTCTTTAACGATTAAAGACGGTGCA 9286 Query 29734 AGTTTGTAATAACGGAAGCCACCACCACCTTGCCAGTTTACAGACTTAGAAATACCACCT 29793 ||||||||||||||||| ||||| |||||||||||||| |||| ||||| | ||| ||| Sbjct 9285 AGTTTGTAATAACGGAAACCACCGCCACCTTGCCAGTTAACAGTTTTAGATACACCGCCT 9226 Query 29794 TGATCTTCGCCATCGATCACTTTTTCCAAGCGCGG-AATAATATGGGTATGACAATG-AT 29851 |||||||| ||||| || ||||||| || || || || | || | | |||||| || Sbjct 9225 TGATCTTCACCATCAATGACTTTTTGTAACCGGGGTAACACTA-CATTGTCACAATGCAT 9167 Query 29852 CACCTAGCTCGATTGAGATCCAGCGTCTTTTCATCTTATGAGCTACAGCAGCAGTAGTTC 29911 | |||||||| | |||||||| | ||||||||||||||| ||| | ||||| | Sbjct 9166 C-CCTAGCTCAACCATAATCCAGCGGCGCCCCATCTTATGAGCTACCGCACCTGTAGTGC 9108 Query 29912 CCGAACCACCGAATGAATCCAATAC 29936 | |||||| | || ||||| || || Sbjct 9107 CAGAACCAGCAAAAGAATCTAAAAC 9083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 435206344432960