Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq302683 98.7 9e-16 seq87110 84.2 2e-11 >seq302683 Length=202 Score = 98.7 bits (108), Expect = 9e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 15300 AATTCTCCTAACTTCTGGGATGGTCAGACCAAAGGTAACAAACACTACTTCTTTATGCTG 15359 || ||||| ||| ||||| || | | | || ||||| || |||||||| |||||| Sbjct 1 AACTCTCCGAACCATTGGGACGGGGAAGCGACTGGCAACAAGCATTACTTCTTCATGCTG 60 Query 15360 GAAGGTTGCATTAACCCTGACGATACTCGTGGCTTCTACAATGAGTATCTGCGTGACGAG 15419 || ||| | | || | |||||| || |||||||| ||||| |||||| | || Sbjct 61 GACGGTGCTGTGCAGCCGGGTTCTACTCGCGGTTTCTACAACGAGTACCTGCGTAATGAA 120 Query 15420 CTGCATGAGCATCGTAAAGTGTTCGAAGTGTTGGGTTCCAAGCTCAAAGCTGAACACTCC 15479 ||| |||||| || |||||||||||| ||| | |||| | |||| | | || Sbjct 121 CTGGTTGAGCACCGCAAAGTGTTCGAACATCTGGCTGGCAAGATGAAAGTTCCAGCATCA 180 Query 15480 ACTGATCAACTGAGCGGCCTGG 15501 || || |||||||||||||||| Sbjct 181 ACGGAGCAACTGAGCGGCCTGG 202 >seq87110 Length=3111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/245 (68%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 101417 TGACCGTGATTACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGAAAAAGGTT-TCA 101475 ||||||||||| ||||| || || || || | ||| | || | | | | || | ||| Sbjct 428 TGACCGTGATTGGGTGGTGGTTGGCGCGACCCCCGATGCATTGTTAGCACAGGGCTATCA 369 Query 101476 CCCAGGTTGGCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCAC 101535 | || | || || ||| ||||| | | ||||| || | |||||||| || | Sbjct 368 GCAAGCGGGTCG-TGATTTTCCGGTATTTCTCCATCCGACCACTCACGAAGAATATGCCC 310 Query 101536 TGGCCCGTACTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGACCTTCTTCAGCC 101595 | |||||||| ||||| ||||| ||| || ||| || ||||| || || | | Sbjct 309 TTGCCCGTACCGAGCGCAAAACCGGTAGCGGTTATAACGGTTTTGATACGCGTTTTACAC 250 Query 101596 CGGATGTAACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGCTA 101655 |||| || || || || || ||| | ||| || || ||||| |||||||||||||| Sbjct 249 CGGAAGTCACGCTTGAGGACGATCTGCAGCGCCGCGATCTGACCATCAATGCGATGGCGC 190 Query 101656 AAGAC 101660 ||||| Sbjct 189 AAGAC 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454575914228520