Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq65234 102 9e-17 seq462907 86.0 7e-12 seq266188 86.0 7e-12 >seq65234 Length=1614 Score = 102 bits (112), Expect = 9e-17 Identities = 272/412 (66%), Gaps = 8/412 (2%) Strand=Plus/Plus Query 147783 ATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACACCTTTATTGTT 147842 |||||| || || ||||||| | ||||| | | || || || | ||| |||| || Sbjct 658 ATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATT 717 Query 147843 TTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACAATGTTGCTGC 147902 ||| | ||| | | ||||| | ||||| |||||| ||||| || | | ||||| || Sbjct 718 TTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGC 777 Query 147903 ACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAGCTTGAATAGT-TTTCCAGA 147961 || || | || |||||||| ||||| ||||| || | ||| | ||| ||| | | Sbjct 778 CCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGA-AGTGTTTATAAA 836 Query 147962 ATGGAATCACGCCTGTGTGCTTAACTTCACCATGTCCAATCTTAGAACCTTCT---GCAC 148018 | ||||| || || || |||| |||| || || || || | || || | Sbjct 837 AAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGAT---AGGACTTCCTAAAGCTC 893 Query 148019 GAATCATACCAGCGTTAACACCAATACCAGCTCGTTTACTGATGTACTTAATGATTGAAG 148078 |||| ||||||||||| || || || ||||||| | | || || | |||| | Sbjct 894 GAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCAC 953 Query 148079 CATTTGTGGTATTAATCGAATCCAGTGAATCACCACCTTCAATAACAACACAACTCGAGA 148138 | |||| | |||||| || | | ||| ||| |||||| | |||||| | Sbjct 954 TAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAA 1013 Query 148139 ATTGACGAGTCGGAGTACGAACACCTGCCATAATTGGAGTTGGCAGTGAAAT 148190 |||||||||| || || | || |||| |||||| || || || || || || Sbjct 1014 ATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATAT 1065 >seq462907 Length=336 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 77985 TCTGGTGGCCCCATCCGGACTTGAACCGGAAACCTACCAGTTATGAGCCGGGCGCTCTAA 78044 ||||||||||||| | ||||||||||| | ||| | | ||||||| || | ||||||| Sbjct 20 TCTGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGTGCTCTAA 79 Query 78045 CCAATTGAGCTATAGGGCCTGA 78066 |||| |||||||| |||||||| Sbjct 80 CCAACTGAGCTATGGGGCCTGA 101 >seq266188 Length=1227 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 139402 ATGTCAAATGAGCCATTCAATTCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTT 139461 || ||||||||||||| || | |||||||| || || |||||||| |||||||| || Sbjct 585 ATATCAAATGAGCCATCCATATGCGGGTCGTTGATTAATCCTTTCCACCCTACAGTGGTA 644 Query 139462 CTTGGTTTCTCAAAATAAACACGCATAACCAA 139493 | ||| |||||||| ||||| ||||| || || Sbjct 645 CGTGGCTTCTCAAAGTAAACGCGCATCACTAA 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564783074109480