Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq201909 416 7e-112 seq248231 351 3e-92 seq150516 273 6e-69 seq369136 149 2e-31 seq37562 129 2e-25 seq123396 123 6e-24 seq365737 98.7 3e-16 >seq201909 Length=21394 Score = 416 bits (460), Expect = 7e-112 Identities = 601/840 (72%), Gaps = 26/840 (3%) Strand=Plus/Minus Query 26001 TCATCGCCACTGCTCCCCGAACGTGAAGCCAATCTCCTTTAGCGCTTCGTCCATCTTTTC 26060 ||| ||||| || || || ||| |||||| || || |||| |||||| || || Sbjct 20630 TCACCGCCATTGGTCGCCAAACTCGAAGCCTATTTCAGCGAGCGAGATGTCCATTTTCTC 20571 Query 26061 GATAAATTCCGGTACCATTTCGTTGAAGAGGGACATGTATTTGTCGTCTCGCTCAACAAC 26120 ||| || ||||| |||||||| | ||| || |||||||| ||||| |||||||| | Sbjct 20570 GATGAACTCCGGCACCATTTCCTCAAAGTCAGAAATGTATTTTTCGTCACGCTCAACGAT 20511 Query 26121 CACGTGGTGGATACCTTCTCGTTTCATGCGCGGGTCATAATTCGCGAAATACCATGCATC 26180 | ||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||| Sbjct 20510 AATGTGATGAATACCTTCACGCTTCATGCGAGGGTCATAGTTCGCGAAATACCAGGCATC 20451 Query 26181 TCTCCCGGTTACCCACATGCTGAATTGCACCTGGGCCATATAGGCGGATTTGATAGCCTC 26240 | || ||||||||||||||| |||||||||||||||| || || |||||| || || Sbjct 20450 CTTGCCCGTTACCCACATGCTGTATTGCACCTGGGCCATGTACGCACTTTTGATGGCATC 20391 Query 26241 GAAGCCGCCAAGCCTGAATTTCATAAAGTCGCGAGAGGTGAAAGGGCACTTCAACTCAAG 26300 ||| || ||||||| ||| ||||| || |||||||| ||||||||||||||||| || || Sbjct 20390 GAAACCACCAAGCCGGAACTTCATGAAATCGCGAGAAGTGAAAGGGCACTTCAATTCGAG 20331 Query 26301 ACCGCGGCCATCACTGCACAGGCCGTCAGGAGAACAGGCGGTACGCATGCCCTCGTCACG 26360 || || ||||||||||| | |||||||| || || |||||||||| || || || Sbjct 20330 GCCTCGCCCATCACTGCAAATCCCGTCAGGTGAGCACGCGGTACGCAAAGAATCATCGCG 20271 Query 26361 GAAAAGGATCGGCGACCCGGTGACCTTCACGTCAGTGGTGAACTCAAACAGGGTGCGAGC 26420 | ||||| |||| | | || || ||| |||||||||||||||| || | | || Sbjct 20270 ATAGAGGATTGGCGCCTCAGTTACAGATACGCCAGTGGTGAACTCAAAAAGAGCTCTCGC 20211 Query 26421 ATCGTCCTCATACTGTTTCCCCCAGGCCAGCGCCTTGGCGTTAACTTCCGGTGCCACGCC 26480 ||| |||| ||| || ||||| || || |||||||| || || ||||| |||||||| Sbjct 20210 TGAGTCTTCATGCTGCTTACCCCACGCAAGTGCCTTGGCATTCACCTCCGGAGCCACGCC 20151 Query 26481 GGTGCAAACTTCGGCAAGAAGGGTGAGAAAGTAGGACATCTTCATATCAGTCCACTTCTT 26540 ||||| || || || | | | | ||||||||||||||||| || ||||| || | Sbjct 20150 AGTGCATACCTCTGCTAACAACTCGTGGAAGTAGGACATCTTCATGTCCGTCCATTTGGT 20091 Query 26541 GCCCGACTTTGGCCTGGAAATGACGTTGTGA-ACTTCGGAAGCAGTGATGACACCGAGGC 26599 ||| |||| | ||||||||||| ||| || || || || ||||| ||||| | Sbjct 20090 GCCGCTGCGTGGCTTTGAAATGACGTT-TGATACACACGACGCCGTAATGACGCCGAGTC 20032 Query 26600 GTAGACGGTGCCACGCGTCATC-ACCTTGCTCGATGTTGCTAACGTCAATACCTGTACGA 26658 | || || ||||| | | | | |||||||| || || || || | |||||| | Sbjct 20031 GCAGGCGCTGCCA-GTCTGAGCTTCCTTGCTCAATAACCCTGACATCGACACCTGTTCTT 19973 Query 26659 GCCAGGATAATTTCTG---GTGTCATGCTTCCACCTTCTGTTCTGCAGCTTTCTGTTT-- 26713 ||| || | |||| ||||||| || |||| |||| |||| Sbjct 19972 TTCAGTATTAGCTCTGCCTCAATCATGCTGCCGCCTT---------AGCT---CGTTTCG 19925 Query 26714 -CAGGAATCCGAGGGCTTTCACTGCTTCGATTTGCGTAAGATCTGACGATGCACCAATAT 26772 |||||| || | || || | |||||| ||| ||||| ||| | | ||| || Sbjct 19924 ACAGGAAGTCGTGAGCCTTGATAGCTTCGGTTTCAGTAAGCTCTTCTGCT--ACCTTAAT 19867 Query 26773 CG--CGGCGGAAGATTTGGGAGCAGAGCGGCAGCAGATCGTCATCCCATGTTTTATTCAT 26830 || | |||||| || ||| || || ||||||| || | ||||| ||||||| ||| Sbjct 19866 CGGCCTGCGGAAAATGCTGGAACAAAGTGGCAGCATGTCTGCCTCCCACGTTTTATCCAT 19807 Score = 217 bits (240), Expect = 4e-52 Identities = 523/778 (67%), Gaps = 34/778 (4%) Strand=Plus/Minus Query 30948 TATTAAAAGATCTACGTCCGAGAATTCTGACGAATCCTCTGACAAGCCAAGAAAGAAACC 31007 || ||||| || |||||||||||||| ||||||||||||||||||| | || | Sbjct 12150 TAATAAAAACCCTTCGTCCGAGAATTCTAACGAATCCTCTGACAAGCCTCGCAAACGCCT 12091 Query 31008 TCATGTTCTAAAACCCGAAGCAGCGATTCAGAGAGGCAACAAGTGGGGAACTGCTGAAGA 31067 || | | | | ||||||| |||||||| || || |||||||||||| |||| || Sbjct 12090 TCCGGCAGTTCGAGCAGAAGCAGGAATTCAGAGTGGAAATAAGTGGGGAACTCCTGATGA 12031 Query 31068 CCTAACTGCTGCCGAGTGGATGTTTGACCTGATAAAAACCATTTCTCCATCAGCCAGAAA 31127 ||| | ||||| ||||||||||| || | | || | || || || |||| | | Sbjct 12030 CCTTAAAGCTGCTGAGTGGATGTTCGATGTCGTCAAGTCAATCGAGCCTTCTGCCAAACA 11971 Query 31128 ACCTAACCTGGCAGGATGGGCTAACGATATACGCCTGATGCGTGAATGTGACGGACGAAC 31187 || | | || |||||||| ||||| ||||| |||||||| || ||||| || Sbjct 11970 GCCAGCCTTTGCCGGATGGGCGAACGACATACGACTGATGCGGGAGAAAGACGGTCGGGA 11911 Query 31188 ACATCGCGACATGTGCGTGCTGTTTCGCTGGGCGTGCCATGACAGCTTCTGGGCTGGCAA 31247 ||||||||||||||| ||||| |||||||| | || |||||||||||| |||||| Sbjct 11910 CCATCGCGACATGTGCAGCCTGTTCCGCTGGGCCAGTCAGGACAGCTTCTGGTGTGGCAA 11851 Query 31248 CGTCATTAGCCCGGCAAAGCTCCGCGAAAAGTGGACTCAACTCGATATCAACCGC-AACA 31306 ||| || |||| || ||||| ||||| |||||| | || || | ||||| ||| | | Sbjct 11850 CGTGCTTTGCCCTGCCAAGCTTCGCGAGAAGTGGTCACAGCTGGTAATCAAGCGCGATAA 11791 Query 31307 AGCAACAGACTGGCACAACTGCCTCT---AAGTCAAAACTTGACCTGAATAACACTGACT 31363 ||| | | || | |||| |||||| ||| | | |||||| | ||||| || | Sbjct 11790 AGCCA-AAACAGCCACA---GCCTCTGGCAAGCCTGCTTTGGACCTGGACAACACGGATT 11735 Query 31364 GGATATACGGAGTGGAGCTATGAAAAACATTGCTGCGCAG--ATGGTTAATTTTGACCGT 31421 |||| | || || | ||||| |||| ||| | ||| || ||| || | Sbjct 11734 GGATTAAAGGGGTAACGGTATGAGAAACGTTG--TCACAGCCATCCAGAATCGCGA---T 11680 Query 31422 GAGCAGATGCGCCGTATTGC--CAACAACATGCCGGAACAGCATAACGATAAGCCGCAAG 31479 | ||| || |||| || | ||||| || ||| | |||| || | Sbjct 11679 G-GCAAAT------CTTTGCAGCAGATGTACGCCGG---AGAGAAACCA-AAGCAACAGG 11631 Query 31480 T---TGAGCAGGTTGCTAAGGTCATCAACAACGTGTTTAGTCAGCTTATGGCAGCGTTCC 31536 | |||||||| ||| | || |||| | |||| || ||||| | || || |||| Sbjct 11630 TGCCTGAGCAGGCCGCTCAAATCTTCAATGAGTTGTTCAGGCAGCTGAAGGGCGCTTTCC 11571 Query 31537 CTGCTACCACAGCTA--ATC-GCAGCCAGGCTGAGATGAACGAAATCCGGCGTCAGTGGG 31593 | || | || | ||| | ||| | ||| | ||||| | ||||| ||||||| Sbjct 11570 CGGCACTGATGGCAAGCATCAAAACCCAAGAAGAGTTAAACGAGCTGCGGCGCCAGTGGG 11511 Query 31594 TTCTGGCTTTCCGTGAGAACGACATCACCACCATGGAGCAAGTTGCGGCCGGAATGCGTG 31653 | |||| || ||| |||| ||| || || || || || ||| ||||| ||| Sbjct 11510 TGATGGCCTTTGCTGAAAACGGCATTACGACAATCGACCAGGTTAACGCCGGGATGAAGA 11451 Query 31654 TCGCCCGCCGTCAGGAACGTCCGTTTCTTCCGTCTCCAGGCCAGTTTGTCGCATGGTG 31711 | ||||||| |||||| || || || ||||| || ||||| || ||||| ||||| Sbjct 11450 TTGCCCGCCAGCAGGAAACGCCTTTCCTCCCGTCGCCGGGCCAATTCGTCGCCTGGTG 11393 Score = 152 bits (168), Expect = 1e-32 Identities = 206/281 (73%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 39936 CGCCAGCGTGACATTGCCGCCCTCGATGCAAAATACACGAAGGAACTAGCTGATGCACAG 39995 |||||||| || |||| || || || || || ||||| ||||| |||| |||||||| Sbjct 4103 CGCCAGCGCGATGTTGCTGCTCTGGACGCCAAGTACACAAAGGAGTTAGCCGATGCACA- 4045 Query 39996 ACCAGGAA-TACTGATTTGCAGCGCCGCCTTGCTGCTGGTGGCCGGGTGCGTGTCGAAGG 40054 | | | || ||||| |||||||| | |||| | |||||| |||||||| ||| |||| Sbjct 4044 AGCTGAAACTACTGCTTTGCAGCACAAGCTTGATAATGGTGGTCGGGTGCGCGTCAAAGG 3985 Query 40055 ACGCTGTACAGTGCCAACCA-CAACCAAAACCGCCAGTACCCGCCGTGTGGGCAATGCTG 40113 | ||| || | ||| || |||| | ||||| ||| | | ||||||||| || Sbjct 3984 AAACTGC-CAATCCCAGCCGTCAACTACCTCCGCCC---CCCCCAGCTTGGGCAATGATG 3929 Query 40114 CCACCGTCGAACTCTCTCCAGTTGCTGGACAAAACGTTCTCGATATCCGCGCCGGAATCA 40173 ||||||||||||||| |||||||||||| |||||||||| |||||| |||||||| Sbjct 3928 GAACCGTCGAACTCTCTTCAGTTGCTGGACGAAACGTTCTCAGTATCCGATCCGGAATCC 3869 Query 40174 TCAGCGATCAGGAAAAACTGAAGTATTTGCAGGAGTACATC 40214 |||| ||| | ||||| | | ||||| |||||| Sbjct 3868 AGCGCGACCAGTCAGCACTGAGGGCGCTTCAGGAATACATC 3828 >seq248231 Length=1874 Score = 351 bits (388), Expect = 3e-92 Identities = 290/354 (82%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 30544 GTGGCAGATCTCGATGATGGCTATACGCGCCTGGCAAATGAACTTCTGGATGCCGTGATG 30603 ||||| | || || ||||| | |||||| || || || || || ||||| |||| Sbjct 1514 GTGGCGCAGCTTGAAGATGGTTTCTTGCGCCTTGCGAACGAGCTACTCGATGCGACGATG 1455 Query 30604 TGTTCTGGTTTGCCGGAGACTGAGCTGTGCATCCTGATGGCCGTATGGCGCAAAACGTAT 30663 || ||||||||||| |||||||| || || || | |||||||| |||||||||||||| Sbjct 1454 TGCTCTGGTTTGCCAGAGACTGAACTCTGTGTCGTCATGGCCGTCTGGCGCAAAACGTAC 1395 Query 30664 GGATACAACAAGAAAATGGACTGGATCAGCAACGAGCAGTTAGAGGAGATGATTCAGAAG 30723 |||| || ||||||||||||||||| |||||||||||| | |||| |||||| ||| Sbjct 1394 GGATTCAGTAAGAAAATGGACTGGATTAGCAACGAGCAGCTTGAGGGGATGATCGGAAAG 1335 Query 30724 CATCATACCCATTGCTCGACAGCAAAAAACAGTCTGATCAGGAAGAAGGTACTGATTCAG 30783 |||| ||| |||||||| || ||||||| |||||| |||||||||| || ||||||||| Sbjct 1334 CATCTTACTCATTGCTCAACTGCAAAAACCAGTCTCGTCAGGAAGAAAGTCCTGATTCAG 1275 Query 30784 GAAGGCCGCAGGGTTGGTATGAATATCCATATTTCCGAGTGGCAAACTAAAAATAACGGA 30843 |||||||| | ||||| |||||| | ||||| | |||||| |||| || ||||||||| Sbjct 1274 GAAGGCCGGAAAGTTGGCGTGAATACCAATATTGCTGAGTGGGAAACCAAGAATAACGGA 1215 Query 30844 TTCTGCAAAACATTAGCTAAACCTGCTAAGAAAACCTTAGCGGAAGTTGCTAAC 30897 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct 1214 TTCTGCAAAACATTAGCTAAACCTGCTAAGAAAACATTAGCAGAAGTAGCTAAC 1161 >seq150516 Length=8092 Score = 273 bits (302), Expect = 6e-69 Identities = 365/516 (71%), Gaps = 6/516 (1%) Strand=Plus/Minus Query 1 ATGGCAAAACCGGACTGGGAGGCCATCGAGACGGCATACCGGGCCGGAGTGATGTCTCTC 60 |||||| ||| ||||||||||| |||||| |||| |||||||| || |||||||||| Sbjct 2736 ATGGCATCACCTGACTGGGAGGCTATCGAGTCGGCTTACCGGGCTGGCTTGATGTCTCTA 2677 Query 61 CGTGAAATTGCGTCACATCATGGTATTAGTGAAGGTGCTATCCGCAAGCGCGCAAAGCGT 120 |||||||| || ||||| || | ||||||||||| || || || || | ||||||||| Sbjct 2676 CGTGAAATCGCCTCACAACACAGCATTAGTGAAGGCGCCATACGAAAAAGAGCAAAGCGT 2617 Query 121 GATGACTGGTCCCGTGATCTTAACGCCAGGATTCAGCAAAAG---GCTGATGATCTGGTA 177 ||||| ||||| ||||| ||| ||| | | | | || || ||||||||||||||| Sbjct 2616 GATGATTGGTCGCGTGACCTTGCCGCGAAGGT---GAAAGAGCGTGCTGATGATCTGGTA 2560 Query 178 CGCAAACAGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACAGAACGCGTACTG 237 |||||||| || | | ||||||||||||| Sbjct 2559 CGCAAACAAGAGGTACGCAAGCAGGTACGCGCTGAGAGCGCACTGTCAGAACGCGTACTT 2500 Query 238 ATAGAAGCCACAGCGGAGGTAATAGCCTCGGTACGCATGGAGCACCGGGGCGATATTCGC 297 || |||||||| || ||||| || ||| | || || |||||||| || || ||||| Sbjct 2499 ATTGAAGCCACCGCAGAGGTCATTGCCACTGTTCGTATGGAGCATCGCGGTGATATCAAG 2440 Query 298 CGGGCCCGGGAACTCACAAACACGCTTTTTGATGAACTTGGTGCGCAGTGTGCTGATGTG 357 |||||| || || |||| || | ||||||||||| ||||| || ||||||||||||| Sbjct 2439 CGGGCCAGGCAAATCACCAATGCTCTTTTTGATGAGCTTGGCGCTGAGTGTGCTGATGTT 2380 Query 358 GGGGCGCTGGAGCAGCTGGGTGACATCATGTTCGCTCCTGACGATAAAGGCCGTGACCGG 417 | ||||||||| || |||| || | |||||| || |||||||| || | ||||| Sbjct 2379 GCTGCGCTGGAGAAGTTGGGCGAGTTGATGTTCAACCCCGACGATAAGGGGCAGGACCGC 2320 Query 418 CTCAACGAAACTTATCAAAAAGTCATCAGTCTGCCTTCCCGTGTGAAATCTCTGAAAGAC 477 || || || | |||||| || |||||||| |||| || || || || | || | Sbjct 2319 CTGAATGAGATTTATCATAAGGTCATCAGCATGCCAGATCGCGTCAAGTCGGTTAAGGCA 2260 Query 478 CTGAGCGACAGCCTGAAAACGTTGATCGGCCTAGAG 513 || ||||| ||||||| | ||||| || ||| Sbjct 2259 CTCAGCGATGCGCTGAAAAACCTCATCGGACTTGAG 2224 >seq369136 Length=224 Score = 149 bits (164), Expect = 2e-31 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 26001 TCATCGCCACTGCTCCCCGAACGTGAAGCCAATCTCCTTTAGCGCTTCGTCCATCTTTTC 26060 ||| ||||| || || || || |||||| || || || | | ||||| ||||| Sbjct 44 TCACCGCCATTGGTCGCCAAATTCGAAGCCGATTTCAGCCAGAGATAAATCCATTTTTTC 103 Query 26061 GATAAATTCCGGTACCATTTCGTTGAAGAGGGACATGTATTTGTCGTCTCGCTCAACAAC 26120 ||| |||||||| |||||||| | |||| |||||||||||| ||||| |||||||| | Sbjct 104 GATGAATTCCGGCACCATTTCTTCGAAGTCGGACATGTATTTTTCGTCACGCTCAACGAT 163 Query 26121 CACGTGGTGGATACCTTCTCGTTTCATGCGCGGGTCATAATTCGCGAAATACCATGCATC 26180 | ||| || |||||||| || |||||||| |||||||| |||||||||||||| ||||| Sbjct 164 TATGTGATGAATACCTTCACGCTTCATGCGAGGGTCATAGTTCGCGAAATACCAGGCATC 223 >seq37562 Length=17931 Score = 129 bits (142), Expect = 2e-25 Identities = 140/182 (77%), Gaps = 8/182 (4%) Strand=Plus/Plus Query 24327 CTCATGATTTTCGGCGTACACTGGCAACCAGACTT-TCAGAAGAAGGTATAGCTCCGCAT 24385 |||||||||| |||| |||||| || | |||| |||| ||||||||| | || || Sbjct 2369 CTCATGATTTCAGGCGCTCACTGGTTACGA-ACTTATCAGGAGAAGGTATCGTGCCCCAC 2427 Query 24386 GTTATTGAGAAAATGTTGGGGCATGAGCTGGGCGGCGTACTTTCTGTTTATAACAAACAT 24445 || | || || ||| ||||||||||||||||||| ||| | | |||||||||||||| Sbjct 2428 GTCACCGAAAATATGCTGGGGCATGAGCTGGGCGGGGTAATGGCGATTTATAACAAACAT 2487 Query 24446 GACTGGATTGCTGAACAG---AAAGCCGCCTATGAGCTGTACGCTGAAAAAATATTCTGG 24502 |||||| ||| ||| ||| ||| ||||||||||| |||||||| ||| | | ||| Sbjct 2488 GACTGGCTTGATGAGCAGCGCAAA---GCCTATGAGCTTTACGCTGATAAAGTCCTGTGG 2544 Query 24503 CA 24504 || Sbjct 2545 CA 2546 >seq123396 Length=12579 Score = 123 bits (136), Expect = 6e-24 Identities = 139/182 (76%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 24327 CTCATGATTTTCGGCGTACACTGGCAACCAGACTT-TCAGAAGAAGGTATAGCTCCGCAT 24385 |||||||||| |||| |||||| |||| |||| |||| |||||||| || || Sbjct 12277 CTCATGATTTCAGGCGCTCACTGGTTACCA-ACTTATCAGGCGAAGGTATCATGCCCCAC 12219 Query 24386 GTTATTGAGAAAATGTTGGGGCATGAGCTGGGCGGCGTACTTTCTGTTTATAACAAACAT 24445 || | || || ||| ||||||||||||||||||| ||| | | ||||||||||||||| Sbjct 12218 GTCACCGAAAAGATGCTGGGGCATGAGCTGGGCGGGGTAATGGCGGTTTATAACAAACAT 12159 Query 24446 GACTGGATTGCTGAACAG---AAAGCCGCCTATGAGCTGTACGCTGAAAAAATATTCTGG 24502 |||||| ||| || ||| |||||| |||||||| |||||||| ||| | | ||| Sbjct 12158 GACTGGCTTGAGGAGCAGCGCAAAGCC---TATGAGCTTTACGCTGATAAAGTCCTGTGG 12102 Query 24503 CA 24504 || Sbjct 12101 CA 12100 >seq365737 Length=223 Score = 98.7 bits (108), Expect = 3e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 18253 ATCAGGCAGGGGCAGAGTGTCGCGATACCATCCATCACACCATTTGAAGGTGTGGACGGG 18312 || ||||| | ||||| ||||| || || | ||||||| || || | | ||||| Sbjct 208 ATTAGGCAAGCACAGAGCGTCGCATTATCAAGCCTCACACCGTTCGATGCGTTAGACGGT 149 Query 18313 GCGATCGCTAATATTGCTGGTGTGACGCGCCACAAGCTCTATGAAAATGATACAGGAAAG 18372 |||||||| ||| | | || || ||| | |||||||||||||| || ||||| | | | Sbjct 148 GCGATCGCCAATGTCACAGGCGTAACGAGACACAAGCTCTATGAGAACGATACTGAATCG 89 Query 18373 ACTGACGGTAACGGGCTTCCTCCGCATTCCATCTCGGCCATTGTTGATGGTGGTGATGT 18431 | || | || || || || | || ||||| ||||||| ||||| ||||||||||| Sbjct 88 AAAGATAGCAATGGCCTGCCAGCCCACTCCATAGCGGCCATCGTTGACGGTGGTGATGT 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129474266860604