Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028776.1 Length=59670 Score E Sequences producing significant alignments: (Bits) Value seq201909 84.2 8e-12 >seq201909 Length=21394 Score = 84.2 bits (92), Expect = 8e-12 Identities = 252/384 (66%), Gaps = 14/384 (4%) Strand=Plus/Minus Query 572 GTAGTCTGGAAACCACATCCAGGTTCACAGACACTCGCTCTATCCTGCCC---CGCTGAT 628 ||||| ||||| || || || ||||| | || || || |||||| || ||| Sbjct 2196 GTAGTTTGGAAGCCTTTACCCGGATCACAATCTCTGGCCCTCAGCTGCCCATGCGATGAA 2137 Query 629 ATTATCCTATACCACGGAACTCGCGGTCCTGGAAAAACGGACTGC-CAGCTTATGCGTTT 687 ||| || | | ||||||||||| || ||||| || | | || |||||| || || Sbjct 2136 ATT---CTGTTTGAGGGAACTCGCGGGCCCGGAAAGACAG-CGGCACAGCTTGCCCGCTT 2081 Query 688 CCGTAAGAACGTTGGCGTAGGGTACGGTAAATTTTGGAAGGGTATTATATTCGACCGTGA 747 ||| || || |||| ||||| | || ||| || || ||||||||| ||| Sbjct 2080 CCGGCGACTGGTAGGGTTAGGTTACGGCACGTTCTGGCGCGGCATCATATTCGACACTGA 2021 Query 748 ATATAAAAACCTTGATGACCTTGTAACTAAATCCCAGCGTTGGTTTCCTGAATTTAAAGA 807 ||| |||||||| | || | | ||| | || ||||| || || || || Sbjct 2020 ATACAAAAACCTCGCAGATATCATCACTCAGTCAAAGCGTATGTATCGGCTTTTCGGTGA 1961 Query 808 CGGGGCTAAATTCCTTAGCTCTAAGTCTGATTATAAATGGGTTTGGCCTACAGGTGAAGA 867 || || | |||||||| ||| ||||| |||||| |||||||| ||||| || Sbjct 1960 TGGCGCCAGATTCCTTAACTCAGCATCTGAACTGCGATGGGTATGGCCTACGGGTGAGGA 1901 Query 868 GCTACTGTTCCGCGTTGCTTGTAAAGA---AAAGGATTACTGGTCTTATCACGGTCACGA 924 ||| || |||||| | | ||||||| | || || ||| ||| || || || || Sbjct 1900 GCTGCTTTTCCGCTTCG---GTAAAGAGGCTGACGACTATTGGGATTACCATGGCCAGGA 1844 Query 925 ATACCCATTTATCGGATGGAACGA 948 || ||| || ||||| | ||||| Sbjct 1843 ATTCCCGTTCATCGGCTTTAACGA 1820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189691157226464