Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028872.1 Length=86252 Score E Sequences producing significant alignments: (Bits) Value seq255299 93.3 2e-14 seq366053 89.7 3e-13 >seq255299 Length=12406 Score = 93.3 bits (102), Expect = 2e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 26827 ATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTCG 26886 |||| ||||||| ||| |||||||||||| ||| ||||||| ||| || ||||||||| Sbjct 3372 ATGCGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 3313 Query 26887 AATCCTGTAGGGTGTGCCAAT 26907 |||||||||||| || ||||| Sbjct 3312 AATCCTGTAGGGCGTACCAAT 3292 >seq366053 Length=223 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 26827 ATGCACCCTTAGTTCAATTGGATAGAGCAACGGTCTTCTAAATCGTTAGTTACAGGTTCG 26886 |||| ||||||| ||| |||||||||||| ||| ||||||| ||| || ||||||||| Sbjct 145 ATGCGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCG 204 Query 26887 AATCCTGTAGGGTGTGCCA 26905 |||||||||||| || ||| Sbjct 205 AATCCTGTAGGGCGTACCA 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 274203065737153