Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq199410 87.8 4e-13 seq75855 86.0 1e-12 >seq199410 Length=3174 Score = 87.8 bits (96), Expect = 4e-13 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 567 CCAAAACCGCCGGTGTTGTTTGGGATAATACCCATCAGTTGTGGTGGCACACGGTGAGCT 626 ||||| ||||||| |||||| || ||||| ||||||| || || || || || || || Sbjct 1614 CCAAAGCCGCCGGCGTTGTTCGGCATAATCCCCATCATCTGCGGCGGTACCCGATGCGCG 1555 Query 627 GCTAACACATCATCACGGCTTACGTTTTTAATATTAAAAAATTCGTCT 674 ||| || || |||||||| || ||||||||||||| ||| || ||| Sbjct 1554 CCTAGCATGTCGTCACGGCTCACATTTTTAATATTAAGAAACTCATCT 1507 >seq75855 Length=31220 Score = 86.0 bits (94), Expect = 1e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 12258 AGGCGGCTACACCGGCAACGGTGGCAAATACGAGCCCGCCGGTATTGTGCATAAGGGCGA 12317 ||||||||||||||| | || ||||||| ||| || || |||||||||||||| || || Sbjct 8949 AGGCGGCTACACCGGGCAGGGGGGCAAATTCGACCCGGCGGGTATTGTGCATAAAGGGGA 9008 Query 12318 GTATGTAATGACCAAAGAGGCAACTGCACGCTTGGGTGTGGCAAATCTTAAC 12369 | ||| | |||||||| || |||| || | || |||| ||| ||| || Sbjct 9009 ATTTGTCTTCACCAAAGAAGCGACTGAGCGAATCGGCGTGGAAAACCTTTAC 9060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113645463561052