Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_029000.1 Length=162327 Score E Sequences producing significant alignments: (Bits) Value seq70204 91.5 2e-13 seq366053 82.4 8e-11 seq255299 82.4 8e-11 >seq70204 Length=1350 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 64244 TTGATTTGGCAGTCCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCT 64303 |||| ||| | |||||| ||||| ||||| |||||| ||||||||||||||| |||| Sbjct 924 TTGAAATGGTACGCCCTATAGGATTCGAACCTATGACCTACGGCTTAGAAGGCCGGTGCT 983 Query 64304 CTATCCAACTGAGCTAAG 64321 |||||||||||||||||| Sbjct 984 CTATCCAACTGAGCTAAG 1001 >seq366053 Length=223 Score = 82.4 bits (90), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 64257 CCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATCCAACTGAG 64316 ||||| ||||| ||||| ||||| ||||||||||||||| ||||||||||||||||| Sbjct 216 CCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATCCAACTGAG 157 Query 64317 CTAAG 64321 ||||| Sbjct 156 CTAAG 152 >seq255299 Length=12406 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 64249 TTGGCAGTCCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATC 64308 |||| | ||||| ||||| ||||| ||||| ||||||||||||||| ||||||||| Sbjct 3293 TTGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCTATC 3352 Query 64309 CAACTGAGCTAAG 64321 ||||||||||||| Sbjct 3353 CAACTGAGCTAAG 3365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516077716862920