Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq286911 96.9 3e-15 seq462907 95.1 1e-14 seq189010 95.1 1e-14 seq163857 82.4 8e-11 >seq286911 Length=6367 Score = 96.9 bits (106), Expect = 3e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 19443 TGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC 19502 ||||| ||| ||||| |||||||||||||||| ||||||||||||| ||||||||||| Sbjct 5715 TGGTGGCCCCTGCTGGGTTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 5774 Query 19503 ACTGAGCTACGGG 19515 ||||||||| ||| Sbjct 5775 ACTGAGCTAAGGG 5787 >seq462907 Length=336 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 19443 TGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC 19502 ||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 22 TGGTGGCCCCAGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGTGCTCTAACC 81 Query 19503 -ACTGAGCTACGGG 19515 ||||||||| ||| Sbjct 82 AACTGAGCTATGGG 95 >seq189010 Length=996 Score = 95.1 bits (104), Expect = 1e-14 Identities = 74/86 (86%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 19434 TTTATTTAGTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACT 19493 ||||||| | || |||| |||||| |||||||||||||||| ||||||||||||| || Sbjct 767 TTTATTT--TAATGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCT 824 Query 19494 GCTCTAACCACTGAGCT-ACGGGCCA 19518 ||||| ||||||||||| | |||||| Sbjct 825 GCTCTGACCACTGAGCTAAAGGGCCA 850 >seq163857 Length=4767 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 18949 TAATCCTGGCGACGATGGCAGGACTTGAACCTGCGACATACGGTTTAACAGACCGCCGTT 19008 ||||| |||| | || | ||||| ||||| | ||||||||| ||||||| |||||||| Sbjct 4363 TAATC-TGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTT 4421 Query 19009 CTACCGACTGAACTACA 19025 ||||||||||||||||| Sbjct 4422 CTACCGACTGAACTACA 4438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498606625669880