Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq178804 91.5 5e-14 seq103047 80.6 9e-11 >seq178804 Length=65803 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| |||||||||| |||||||||| ||||||||||| |||||| ||||||| |||| Sbjct 29029 CGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACAGGTTCAAATC 29088 Query 21210 CTGTCTCCGCAAC 21222 ||||||||||||| Sbjct 29089 CTGTCTCCGCAAC 29101 >seq103047 Length=44447 Score = 80.6 bits (88), Expect = 9e-11 Identities = 133/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 18132 GAGATCGCCGAGATCAC-CTCCGGCTTGAAGTCGCTCGCCAGAGAGCTCGATATCGCCGT 18190 ||||||||||||||| | | | |||| ||| | || || | |||||| | | | || Sbjct 2102 GAGATCGCCGAGATCTCACGCTCGCTT-AAGGCACTGGCGAAAGAGCTGCAGGTGCCGGT 2044 Query 18191 CGTTTTGCTGTCGCAGCTTAATCGAGCAGTCGAG-AGCAGAGAGGATAAGCGACCTCTTC 18249 || ||||||||||||||| || | | ||| ||| | | |||||||| || | Sbjct 2043 GGTGGCGCTGTCGCAGCTTAACCGCTCCCTGGAGCAGC-GTGCCGATAAGCGCCCGGTCA 1985 Query 18250 TCTCAGACCTTCGCGATTCCGGTGCGATCGAGCAGGACGCCGACATGATCGCGTTCTTGT 18309 ||| ||||| || || ||||| | ||||||||||| |||||| ||||| ||| | | Sbjct 1984 ACTCCGACCTGCGTGAATCCGGCTCCATCGAGCAGGATGCCGACCTGATCATGTTTATCT 1925 Query 18310 TCCGTGA 18316 |||||| Sbjct 1924 ACCGTGA 1918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161561312455978