Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_029071.1 Length=41085 Score E Sequences producing significant alignments: (Bits) Value seq79893 96.9 9e-16 seq75855 82.4 2e-11 >seq79893 Length=11432 Score = 96.9 bits (106), Expect = 9e-16 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 15550 GTGGCAAATATGATCCGGCTGGCGTGGTTCATAAAGGTGAGTTTGTTTTCACCAAAGAGG 15609 |||| || ||||| || |||||||| ||| ||||||||||||||||||||||||| Sbjct 5077 GTGGGAAGTATGAGCCCAAAGGCGTGGTGCATGGCGGTGAGTTTGTTTTCACCAAAGAGG 5136 Query 15610 CAACGCAAAGAATCGGAGCTAAAAACCTGTATCGCATGATGCGAGGTTATGCAAACGGCG 15669 | || || | ||||| | |||||||| || |||||||||| ||||| || | |||| Sbjct 5137 CGACCCAGCGTATCGGCGTCAAAAACCTTTACGGCATGATGCGGGGTTACGCTGATGGCG 5196 Query 15670 G 15670 | Sbjct 5197 G 5197 >seq75855 Length=31220 Score = 82.4 bits (90), Expect = 2e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 15552 GGCAAATATGATCCGGCTGGCGTGGTTCATAAAGGTGAGTTTGTTTTCACCAAAGAGGCA 15611 ||||||| || ||||| || | || |||||||| || ||||| ||||||||||| || Sbjct 8971 GGCAAATTCGACCCGGCGGGTATTGTGCATAAAGGGGAATTTGTCTTCACCAAAGAAGCG 9030 Query 15612 ACGCAAAGAATCGGAGCTAAAAACCTGTATCGCATGATGCGAGGTTATGCAAACGGCGGT 15671 || | ||||||| | ||||||| || ||||||||| || ||||| | ||| || Sbjct 9031 ACTGAGCGAATCGGCGTGGAAAACCTTTACGACATGATGCGCGGCTATGCCAGCGGTGGC 9090 Query 15672 CAAGTAGG 15679 | ||||| Sbjct 9091 CTCGTAGG 9098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130571722073294