Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_029106.1 Length=62220 Score E Sequences producing significant alignments: (Bits) Value seq131241 82.4 3e-11 >seq131241 Length=5169 Score = 82.4 bits (90), Expect = 3e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40113 AACCTGGCGGGTAGCAGCGGCACCGGCCTGATCATGTTTATGGCCAGCACTGCGAAGTCG 40172 ||| |||| || ||| | | ||| ||||| ||| ||| ||| | ||| || | | Sbjct 1881 AACATGGCCGGCAGCGGTGCCACGGGCCTCATCCAGTTCATGCCGGCCACGGCCGCGGGG 1940 Query 40173 CTGGGCACCACGGTTGAAGCGCTGGCCAAGATGA-CGCAGGCCGAACAGCTGGTCTACGT 40231 ||||| |||||| | ||||| |||||||||| ||| | || || |||| |||||| Sbjct 1941 CTGGGGACCACGACCGGCGCGCTCGCCAAGATGAGCGCCATC-GAGCAACTGGACTACGT 1999 Query 40232 CGAGCAGTATTTCAAACCCTACATCGGCAAGCTGAACAGCCTGGAAGATCTGTACATGGC 40291 |||| || ||| || ||| ||| || || ||||| || |||||||||| Sbjct 2000 GGAGCGCTACTTCGCCCCGTACCGCGGGCGCATGCGCAACCTGGGCGACGTGTACATGGC 2059 Query 40292 GATTCTCTGGCCGGCCGCCGTGGGCAA 40318 ||| ||||||||||| | | | ||||| Sbjct 2060 GATCCTCTGGCCGGCTGGCATCGGCAA 2086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197802782711564