Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq1414 91.5 1e-13 >seq1414 Length=2481 Score = 91.5 bits (100), Expect = 1e-13 Identities = 243/366 (66%), Gaps = 4/366 (1%) Strand=Plus/Plus Query 126075 TCCATATGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCA 126134 || |||||||| ||| | ||| ||||||| ||| | ||||| || || | Sbjct 1487 TCAATATGATTTTTATATAAATGAACATCTCCTCCTGTCCACAAAAATTCTCCAACTTGG 1546 Query 126135 AGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGA 126194 ||| |||| || || | | |||| | |||| ||||| || || ||||| || || Sbjct 1547 AGTTTGCATTGTTGAGCTATCATATGTATAAGTATTGCATAGCTAGCTATATTAAAGGGT 1606 Query 126195 ACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGT 126254 | ||| | ||||| ||| | | ||| || | ||||||| |||||| | | | | Sbjct 1607 AAACCAAGAAATACATCGCAAGAACGTTGGTAAAGTTGACAACTTAATTCTTCTTTTAAT 1666 Query 126255 ACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGA 126314 || ||||||||||| | | | || || || | ||| | |||| ||| ||||| | | Sbjct 1667 ACATAAAATTGAAATAATATATGACATGGAGCTAAAGACATTTTATCAATTTCTCCAACA 1726 Query 126315 TTCCATGCTGAAAC-AATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTGTTGTATAAC 126373 ||||| | || || ||| | | ||||| | |||| ||| | ||||| || || Sbjct 1727 TTCCAAGAAGATACTAATAT-TCTACGAGAATCAGGATCTTCTTTTAGTTGTTTTAGTAC 1785 Query 126374 TGATTTTAATTGATCGTAATGATTTCCATTTTTATCT-TCCCAATCTCTCCATTGTTTAC 126432 ||||| |||||| || | ||| | || || | |||||| |||||||||||| | Sbjct 1786 ATTTTTTATTTGATC-TATTTTTTTTCCGTTAGATGTATCCCAACTTCTCCATTGTTTTC 1844 Query 126433 CATAAA 126438 |||||| Sbjct 1845 CATAAA 1850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406112382758747