Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq103047 132 2e-26 seq479812 104 7e-18 seq113804 91.5 5e-14 >seq103047 Length=44447 Score = 132 bits (146), Expect = 2e-26 Identities = 118/145 (81%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 |||||| ||||| || ||||| | |||||||||| |||||| ||||||||||| | || Sbjct 1905 GTGATACACCTCATCACGGTAGATAAACATGATCAGGTCGGCATCCTGCTCGATGGAGCC 1964 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGT 34162 ||| || |||||||| || | | ||| ||||| ||||| ||||||||||||||||||| Sbjct 1965 GGATTCACGCAGGTCGGAGTTGACCGGGCGCTT-ATCGGCACGCTGCTCCAGGGAGCGGT 2023 Query 34163 TGAGCTGCGACAGCACGATCACGGG 34187 | |||||||||||| | | ||| || Sbjct 2024 TAAGCTGCGACAGCGCCACCACCGG 2048 >seq479812 Length=451 Score = 104 bits (114), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33994 CGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGG---TGTCCGGGTGATAG 34050 || ||||| ||||||| | ||| |||| ||| || | | | | ||| || ||| Sbjct 77 CGATGCTTGCCGATGATGATCTCGGCCAGGCCCTTGTCCGGCGAATTTTCCTTGTTGTAG 136 Query 34051 ACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCG 34110 ||||| ||||| | ||| | ||||| ||| || ||||||||||| || || || ||| Sbjct 137 TAATCGTCGCGGTAGATGAAGACGATCATGTCCGCATCCTGCTCGATTGCGCCCGATTCG 196 Query 34111 CGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGC 34170 || ||||| | ||||| ||| ||||||| | || ||||| |||||||||||||| Sbjct 197 CGAAGGTCGGCCATCACCGGGCGCTTGTCGGTACGTGTTTCCAGCGAGCGGTTGAGCTGG 256 Query 34171 GACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 ||||| | || || || | || ||| ||||||| Sbjct 257 GACAGTGCAATGACCGGCACGTGCAGTTCCTTGGCCAG 294 >seq113804 Length=1483 Score = 91.5 bits (100), Expect = 5e-14 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 42757 ATGCTGATCCTGACCAGAAGACCCGGCGAAACCCTGCATATCGGCGACAACATCACCGTC 42816 ||| ||||| |||| | | ||||||||||||| ||||| ||| | | |||| Sbjct 44 ATGTTGATCTTGACTCGCCGCGTCGGCGAAACCCTGATGATCGGAGACTCGGTGAGCGTC 103 Query 42817 ACGGTCCTTGGCAGCCAGGGCGACCAGGTGCGCCTCGGCATCACCGCCCCGGACGACGTC 42876 || || || ||| | ||||| ||||||||||| |||| |||||||| ||| | ||||| Sbjct 104 ACCGTGCTCGGCGTCAAGGGCAACCAGGTGCGCATCGGTATCACCGCGCCGAAGGACGTT 163 Query 42877 GCCATCCACCGCTCCGAGATCTACCAGC 42904 || | || ||| ||||||||||||| Sbjct 164 GCTGTGCATCGCGAAGAGATCTACCAGC 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159512729392290