Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq261736 486 1e-132 seq226684 221 7e-53 >seq261736 Length=27266 Score = 486 bits (538), Expect = 1e-132 Identities = 673/937 (72%), Gaps = 4/937 (0%) Strand=Plus/Plus Query 78221 GCCATCAACTGGAACAAGGTCACCGACGAGGTCGACGACACCGTGTGGGATCGACTCACC 78280 ||||||||||||||||| || |||||| || |||||| | || || ||| Sbjct 9292 GCCATCAACTGGAACAACATCGAAGACGAGAAAGATCTGGAAGTGTGGAACCGCCTGACC 9351 Query 78281 GGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGACATCCCATCCTGGGACACC 78340 ||||||||||| |||| || ||||||||| |||| ||||| || || | ||| || || Sbjct 9352 AGCAACTTCTGGCTGCCGGAAAAGGTACCGCTGTCTAACGATATTCCGGCGTGGAACTCC 9411 Query 78341 CTTACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTCACCGGCCTCACCCTGCTCGAC 78400 || | | || ||| | | || || || || |||||||||||||| || |||||||| Sbjct 9412 CTGAATGCCGATGAGCAACAGCTGACCATCCGCGTGTTCACCGGCCTGACGCTGCTCGAT 9471 Query 78401 ACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCCGACGCCAACACCCCGCACGAG 78460 ||||||||| ||| | ||||| |||| || ||||| || || ||||| || Sbjct 9472 ACCATCCAGAACACCCTCGGCGCTCCGGCGCTGATGGCCGATGCGCTGACGCCGCATGAA 9531 Query 78461 GAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTACACGCCAAGTCCTACAGCTCG 78520 ||||| ||| | | |||||| || ||||| |||| || ||| || ||||||||| Sbjct 9532 GAGGCCGTGATGTCGAACATCAGCTTTATGGAAGCGGTGCATGCCCGCTCATACAGCTCG 9591 Query 78521 ATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAGGCGTTCCGTTGGTCGGAGGAG 78580 |||||||| ||||| ||| | ||| | |||| | || | | ||| || ||| Sbjct 9592 ATCTTCTCCACGCTGTGCCACACCAGCGATGTTGATGCCGCCTACGCCTGGAGCGAAGAG 9651 Query 78581 AACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGACTACTACCGCGGCGACGACCCC 78640 || ||||||||||||||| ||||| | ||| | ||||| || ||||||| Sbjct 9652 AATCCCCCGCTGCAGCGCAAGGCCGAGATCATTCTGCAGCACTACTACGAGAACGACCCG 9711 Query 78641 TTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTCCTCTTCTACTCGGGCTTCTAC 78700 | ||| |||| | ||||| | |||| || ||||| |||||||| ||||||||| Sbjct 9712 CTAAAGAAGAAGATCGCCAGCGTGTTCCTCGAATCGTTCCTGTTCTACTCCGGCTTCTAC 9771 Query 78701 CTGCCGATGTACTGGTCGAGCCGCGCCAAGCTGACGAACACCGCGGACGTGATCCGGTTG 78760 ||||||||||||||||||||||||| ||||||||| |||||||| || ||||||| || Sbjct 9772 CTGCCGATGTACTGGTCGAGCCGCGGCAAGCTGACTAACACCGCCGATCTGATCCGTCTG 9831 Query 78761 ATTATCCGAGACGAAGCAGTTCATGGGTACTACATCGGATACAAGTACCAGCGAGGCCTC 78820 |||||| ||| || || ||||| || ||||||||||| |||||||| ||| || ||| Sbjct 9832 ATTATCAAAGATGAGGCGGTTCACGGTTACTACATCGGCTACAAGTATCAGAAAGCCCTG 9891 Query 78821 GAGACCCAGGGGCCGGCGCGGCAGGCTGAGCTCAAGGAGTACACGTTCGATCTGCTCTCG 78880 || | || |||| ||| | | ||||| | ||| | | | || ||||| | Sbjct 9892 GAAAAAGAGACGCCGCAGCGTAAAGAGGAGCTGCAACAGTTCGCCGTTGAACTGCTGCTG 9951 Query 78881 GAGCTCTACGACAACGAGTGTGACTACACCGAGCAGCTCTATGACGACGTCGGACTCAC- 78939 | ||| || || || || ||| || ||||| ||| || | | |||||| || | Sbjct 9952 GCGCTGTATGAAAATGAAATTGAATATACCGATGCGCTGTACGCAGGCGTCGG-CTGGCA 10010 Query 78940 CGAGGATGTCAAGAAGTTCCTGCGCTACAACGGCAACAAGGCGCTGATGAACCTCGGCTA 78999 || || || || |||||| ||| ||||| | |||||||||||||||||||||||||| Sbjct 10011 GGAAGAGGTGAAAAAGTTCTTGCATTACAATGCTAACAAGGCGCTGATGAACCTCGGCTA 10070 Query 79000 CGAAGCACTGTTCCCCAAGGAAGAGACC-ATGGCAGACCCGGCCATCATGTCCGCGCTCT 79058 ||| || ||||||||| || |||| ||| | ||||||| ||| | || ||||| | Sbjct 10071 CGAGGCGCTGTTCCCCTCTGAGATGACCGATGTTA-ACCCGGCTATCCTCTCGGCGCTGT 10129 Query 79059 CACCAGGCGGCGACGAGAACCACGACTTCTTCTCCGGGTCGGGCTCGAGCTACGTCATCG 79118 | ||| || ||| || |||||||||||||||||||| || ||||| ||| || || | Sbjct 10130 CGCCAAACGCCGATGAAAACCACGACTTCTTCTCCGGCTCCGGCTCCTCCTATGTGATGG 10189 Query 79119 GCAAAGCTGAAGCCACGGCAGATGAGGACTGGGACTT 79155 | ||||| | | || | |||||| |||||| |||| Sbjct 10190 GTAAAGCGGTCGATACCGAAGATGAAGACTGGAACTT 10226 >seq226684 Length=3079 Score = 221 bits (244), Expect = 7e-53 Identities = 333/472 (71%), Gaps = 6/472 (1%) Strand=Plus/Plus Query 78263 GTGTGGGATCGACTCACCGGCAACTTCTGGTTGCCCGAGAAGGTACCGGTGTCCAACGAC 78322 |||||| |||| |||||| ||||||||||| |||||||||| || ||| | |||||||| Sbjct 847 GTGTGGAATCGTCTCACCAGCAACTTCTGGCTGCCCGAGAAAGTGCCGCTCTCCAACGAT 906 Query 78323 ATCCCATCCTGGGACACCCT---TACGCCGGAAGAGAAGGAACTCACTATGCGTGTGTTC 78379 | || |||| | || || || | || || || | || || || || || ||| Sbjct 907 CTGCCCGGCTGGCAGACGCTGGATAAAC---AACAGCAGCAGCTGACCATCCGGGTATTC 963 Query 78380 ACCGGCCTCACCCTGCTCGACACCATCCAGGGCACAGTTGGCGCCATCTCGCTCATCGCC 78439 |||||||| || ||||||||||| |||||| | | ||||| ||| || | Sbjct 964 ACCGGCCTGACGCTGCTCGACACTATCCAGAACGTGATCGGCGCGCCGGGGCTGATGGAA 1023 Query 78440 GACGCCAACACCCCGCACGAGGAGGCGGTGCTCACCAACATCGCGTTCATGGAGTCGGTA 78499 || |||| ||||||||||| ||||||||||| | || ||| || ||||| |||| Sbjct 1024 GATGCCATTACCCCGCACGAAGAGGCGGTGCTGTCGAATATCAGCTTTATGGAAGCGGTG 1083 Query 78500 CACGCCAAGTCCTACAGCTCGATCTTCTCAACGCTATGCTCCTCCAAGCAGATTGACGAG 78559 || ||| |||||||| |||||||||||||| || || | || || | | || | Sbjct 1084 CATGCCCGCTCCTACAGTTCGATCTTCTCAACCCTGTGTAACACCCAGGATGTGGATGCA 1143 Query 78560 GCGTTCCGTTGGTCGGAGGAGAACGAGTACCTGCAGCGCAAGGCCCAGATCGTCCTGGAC 78619 || | | ||| || ||||| | | |||||| |||||| | ||| ||||||| Sbjct 1144 GCTTATCAGTGGAGCGAAGAGAATGCGCCGCTGCAGAACAAGGCGCGCATCATCCTGGAA 1203 Query 78620 TACTACCGCGGCGACGACCCCTTGAAGCGGAAGGTGGCCAGTACGCTCCTGGAGGGCTTC 78679 |||||| | ||| || || ||||| |||| | ||||| |||| ||| || Sbjct 1204 CACTACCAGGCCGATGATCCGCTGAAGAAGAAGATCGCCAGCGTCTTCCTTGAGTCGTTT 1263 Query 78680 CTCTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCGAGCCGCGCCAAGC 78731 | ||||| || ||||||| ||||||||||||||||||||||| | ||||| Sbjct 1264 TTGTTCTATTCCGGCTTCTGGCTGCCGATGTACTGGTCGAGCCGTGGCAAGC 1315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297500450777978