Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq65234 174 2e-38 seq79071 138 1e-27 seq222524 132 5e-26 seq1462 127 2e-24 seq209331 100 3e-16 seq213894 98.7 1e-15 seq260686 91.5 2e-13 seq119848 91.5 2e-13 seq223569 82.4 8e-11 seq71472 82.4 8e-11 >seq65234 Length=1614 Score = 174 bits (192), Expect = 2e-38 Identities = 287/413 (69%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 139466 CATCAAATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCC 139525 ||| || | ||| | ||| ||| ||||||| | |||||| | | |||||||| | || Sbjct 649 CATTAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCC 708 Query 139526 TTTGTTATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 139585 | | |||||||| ||||| | | |||||||| ||| | |||||| || || ||| || | Sbjct 709 TCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAAC 768 Query 139586 AGTAGCAGCGCCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATG 139645 ||| || || || || | || |||||| || ||||| ||||| ||||| | || || || Sbjct 769 AGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTG 828 Query 139646 TTTCCAAAAAGGAATAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTC 139705 ||| ||||||||||| || |||||| | |||| || | | || | ||| Sbjct 829 TTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAA 888 Query 139706 AGCACGAATCATACCAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAAT 139765 ||| ||||| |||| | ||||| || ||||| || |||| ||| | ||||| ||||| Sbjct 889 AGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAAT 948 Query 139766 TG---AAGCGGAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCA 139822 || || | ||| ||| ||||| || || |||| | ||||| | || || Sbjct 949 TGCACTAGTTGTAGC---ATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACA 1005 Query 139823 TGAACTAAACTGCCGAGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTA 139875 |||||||| || |||||||| || | || | |||||| || || |||| Sbjct 1006 AGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTA 1058 >seq79071 Length=852 Score = 138 bits (152), Expect = 1e-27 Identities = 115/141 (82%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 60709 TTACAAACTCTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 60768 ||| | ||| | || || ||||| | || |||||||||||||| || || ||||| || Sbjct 181 TTAAAGACTTTCAGTAAAGGTACGGGTAATTACGTCGCGCTGCTGCTCAGGCGTCAGTGA 240 Query 60769 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828 |||||| || || ||||| || || |||||||| |||||||||||||| ||||| ||||| Sbjct 241 GTTAAAACGCACGGCATAGCCTGAAACACGGATAGTCAGCTGCGGATAGTTTTCAGGATG 300 Query 60829 CTTAACTGCATCTTCCAGAGT 60849 ||||||||||||||||| || Sbjct 301 TTTAACTGCATCTTCCAGCGT 321 >seq222524 Length=8439 Score = 132 bits (146), Expect = 5e-26 Identities = 106/128 (83%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 60722 GTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 60781 || || ||||| | || ||||| ||||||||||| || |||| ||||||||| || || Sbjct 4038 GTAAAGGTACGCGTAATCACGTCACGCTGCTGTTCTGGCGTCAAAGAGTTAAAACGCACG 4097 Query 60782 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 60841 ||||||||||| || || |||||||||||||||||||| ||||| ||||| || || ||| Sbjct 4098 GCATAACCGGAAACGCGAATGGTCAGCTGCGGATATTTCTCCGGGTGCTTCACCGCCTCT 4157 Query 60842 TCCAGAGT 60849 ||||| || Sbjct 4158 TCCAGCGT 4165 >seq1462 Length=4781 Score = 127 bits (140), Expect = 2e-24 Identities = 288/433 (67%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 139481 TTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 139540 ||| || || ||||| | ||||| | ||||| |||| || || ||||||||||| Sbjct 1431 TTGTACGCCGTAATCTAGGTGACGGACACGGTTACCTTCAACACCACGGTTATTTTTCAG 1372 Query 139541 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 139600 || | | |||||| |||||| ||||| ||||| ||| | || || || || || Sbjct 1371 GACTAATAAGCTTTCAATTTCCAAGTGCCACATAGGGTAAAACAGTGTCGCGGCACCCCC 1312 Query 139601 ACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAAT 139660 || | || || || || || ||||| || || ||||| || ||||| | || || || Sbjct 1311 GCGTACGCCGCCTTGCGAGCAAGATTTCACGGCCGTCTGGAAGTGTTTGTAGAACGGGAT 1252 Query 139661 AACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGAATCATACC 139720 | ||| ||||| ||||||| | ||| ||| |||||||| || Sbjct 1251 ACAACCGGTATGGAAAGCTTCACCACCACGGATTGGGCTGCCTAGCGCACGAATACGGCC 1192 Query 139721 AACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTT 139780 | |||| ||||| || || ||||||| || | |||| ||| || | | |||| Sbjct 1191 AGCATTGATACCGATCCCTGCGCGTTGTGAAACGTATTTAACGATAGCACTAGAAGTGGC 1132 Query 139781 ATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCATGAACTAAACTGCCGAGT 139840 |||||||| | || ||| || ||| |||| |||||||| || || || ||||| Sbjct 1131 GTTGATAGAGTCTAAGCTATCGCCACACTCGATAAGCACGCATGAGCTGAATTGGCGAGT 1072 Query 139841 TGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAATCTGTCGAGTAGATACCGC 139900 || || || |||||||| || || || ||||| ||||| | || || || || Sbjct 1071 CGGCGTCCGTACCCCAGCCATGATTGGCGTAGGTAAGGAAATTTTAAAGGTCGACACGGC 1012 Query 139901 TTCATAAAAACGA 139913 |||||||| ||| Sbjct 1011 ATCATAAAAGCGA 999 >seq209331 Length=9407 Score = 100 bits (110), Expect = 3e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 60719 TTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGA 60778 || ||||| || || | || || || |||||||||| |||||| ||||||||||| Sbjct 313 TTAGTGAAGGTTCGGGTAATCACATCCTGCTGCTGTTCTTTAGTCAGTGAGTTAAAGCGG 372 Query 60779 ACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATG 60828 || || |||||||| || || |||||||||||||||||||| || ||||| Sbjct 373 ACCGCGTAACCGGAAACGCGAATGGTCAGCTGCGGATATTTCTCTGGATG 422 >seq213894 Length=28734 Score = 98.7 bits (108), Expect = 1e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 60709 TTACAAACTCTTGGTGAATGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 60768 ||||| |||| ||||| ||||| | ||| || || |||||||||| |||||| || Sbjct 8989 TTACATGCTCTGAGTGAAGGTACGGGTGATCACATCCTGCTGCTGTTCTTTAGTCAGCGA 8930 Query 60769 GTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGG 60825 ||| ||||| || ||||| || || || || ||||| | |||||||||||||||||| Sbjct 8929 GTTGAAGCGTACCGCATAGCCCGACACGCGAATGGTTAACTGCGGATATTTTTCCGG 8873 >seq260686 Length=13603 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 139476 TTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 139535 ||||| || || || || ||||||||||| | |||||| |||| ||||| ||| || Sbjct 5584 TTCAGCTGCACGCCGTAGTCCATATGACGCACGCGGTTGCCTTCAACGCCGCGGTTGTTC 5525 Query 139536 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 139595 |||| || || || |||| ||||||| |||||| || || || | || || || Sbjct 5524 TTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAACAGGGTCGCTGCA 5465 Query 139596 CCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAA 139655 ||||| || | || ||||| || || || || || || ||||| || || || | || Sbjct 5464 CCGCCGCGCACGCCGCCCTGAGAGCAGGACTTCACCGCGGTCTGGAAGTGCTTATAGAAC 5405 Query 139656 GGAAT 139660 ||||| Sbjct 5404 GGAAT 5400 >seq119848 Length=1010 Score = 91.5 bits (100), Expect = 2e-13 Identities = 81/99 (82%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 68826 TGCATGGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACC-ACTGAGCTA 68884 |||| ||||||||||| |||||||||||||| |||||||||||||||| ||||||||| Sbjct 493 TGCA-GGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACTGAGCTA 551 Query 68885 CACATCCAAATTGGTGGGGAGTGATGGAGTCGAACCACC 68923 | || || ||||||| ||| ||| ||||||| || Sbjct 552 ACGACCCGAAGTGGTGGGTGATGACGGATTCGAACCGCC 590 >seq223569 Length=13158 Score = 82.4 bits (90), Expect = 8e-11 Identities = 79/99 (80%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 68826 TGCATGGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACC-ACTGAGCTA 68884 |||| ||||||||||| |||||||||||||| |||||||||||||||| ||||||||| Sbjct 12647 TGCA-GGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACTGAGCTA 12705 Query 68885 CACATCCAAATTGGTGGGGAGTGATGGAGTCGAACCACC 68923 | || | ||||||| ||| || ||||||| || Sbjct 12706 ACGACCCGATATGGTGGGTGATGACGGGCTCGAACCGCC 12744 >seq71472 Length=1850 Score = 82.4 bits (90), Expect = 8e-11 Identities = 67/78 (86%), Gaps = 4/78 (5%) Strand=Plus/Minus Query 68828 CATGGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACC-ACTGAGCTACA 68886 || ||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||| | Sbjct 1548 CAAGGATTCGAACCTTGGACCTATTGATTAAGAGTCAACTGCTCTACCAACTGAGCTA-A 1490 Query 68887 CATCC--AAATTGGTGGG 68902 || || |||| || ||| Sbjct 1489 CAGCCCGAAATCGGGGGG 1472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542983960507680