Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_031045.1 Length=157855 Score E Sequences producing significant alignments: (Bits) Value seq286911 104 2e-17 seq462907 100 3e-16 seq189010 98.7 1e-15 >seq286911 Length=6367 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19040 TGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099 ||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5791 TGGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAA 5732 Query 19100 TCCAGCCAGGGTCACCA 19116 ||||| ||| ||||| Sbjct 5731 CCCAGCAGGGGCCACCA 5715 >seq462907 Length=336 Score = 100 bits (110), Expect = 3e-16 Identities = 69/77 (90%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 19041 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099 |||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||| Sbjct 98 GGCCCCATAGCTCAGTTGGTTAGAGCACGCGACTCATAATCGCTTGGTCGCTGGTTCAAG 39 Query 19100 TCCAGCCAGGGTCACCA 19116 |||||| ||| ||||| Sbjct 38 TCCAGCTGGGGCCACCA 22 >seq189010 Length=996 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 19040 TGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 19099 |||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct 850 TGGCCCTTTAGCTCAGTGGTCAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAA 791 Query 19100 TCCAGCCAGGGTCACCACTAAATAAA 19125 |||||| |||| || | ||||||| Sbjct 790 TCCAGCAAGGGCCATTA--AAATAAA 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501856617515400