Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq497144 181 3e-41 seq136258 122 2e-23 seq153502 89.7 1e-13 >seq497144 Length=1636 Score = 181 bits (200), Expect = 3e-41 Identities = 204/273 (75%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988 ||| |||||||| ||||||||| ||| ||||||||||||||||| |||| |||| Sbjct 1409 TTCGGTGGTGTACTTCTCAACGCCAGCCTGGTCAGTCCATTTACGGGTCTGCAGTGCGCC 1350 Query 26989 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCC 27048 ||| || | |||| |||||| |||||||||||||| || | ||| ||||||||||| Sbjct 1349 TTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGCTTGCC 1290 Query 27049 GAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTT 27108 ||| | ||||||||||||||||| || | |||||| | |||||| || ||| || Sbjct 1289 GAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTGTCGCG 1230 Query 27109 CCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCG 27168 ||| ||||| || || | ||| |||||||| || || || |||||||||||| Sbjct 1229 CCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGCCATTCGGCATGTAGCG 1170 Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 ||||| || || | || | ||| |||| ||| Sbjct 1169 AACTTCCGGGTCCTGCCCCAGATTTCCGACTAA 1137 >seq136258 Length=1331 Score = 122 bits (134), Expect = 2e-23 Identities = 190/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACC 26985 || ||| |||||||| ||||| ||| |||||| |||||||||||| ||||| Sbjct 55 GACTTCGGTGGTGTAACGCTCCTGGCCACCCTGATCCTGCCATTTACGGGTGCGCAGCTG 114 Query 26986 GCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTT 27045 |||||| || | |||| ||||| |||||||||||| |||| ||| ||||| || Sbjct 115 GCCTTCGATATAGACCTGCGACCCTTTTTTCAGGTATTCACCCGCGACTTCAGCCAGTTT 174 Query 27046 GCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATC 27105 ||| || | || || ||||||||||| || |||||| ||| || || ||| || Sbjct 175 GCCAAACAGAACCACACGGTGCCATTCAGTGATCTCTTTGTTTTCACCGGTCTGCTTGTC 234 Query 27106 TTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTA 27165 ||| |||| | || || | | | |||||||| |||||||| ||||| || Sbjct 235 GCGCCAGCTTTCCGACGTAGCCAGCGTAATGTTGGCAACAGCGCCACCATTTGGCATATA 294 Query 27166 GCGCACTTCTGGATCGTTGCCTAAATTACCGA 27197 || ||||| ||||| | || | ||| |||| Sbjct 295 ACGTACTTCCGGATCCTGACCCAGATTCCCGA 326 >seq153502 Length=4143 Score = 89.7 bits (98), Expect = 1e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 26929 TTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCC 26988 ||| |||||||| || || ||| || || |||||| || || ||||| || Sbjct 1964 TTCGGTGGTGTAACGATCTTGGCCACCTTGGTCTTGCCATTTGCGCGTACGCAGTTGACC 2023 Query 26989 TTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCC 27048 ||| || | |||| |||||| ||||| ||||| ||||| | ||| || | || || Sbjct 2024 TTCGATATAAACCTGAGAGCCTTTACGCAGATATTCGCCAGCAACTTCTGCTAATTTACC 2083 Query 27049 GAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTT 27108 ||| | ||||| ||||||||||| || |||||| ||| || || |||||| Sbjct 2084 GAACAACACAACACGGTGCCATTCAGTAATCTCTTTATTTTCACCGGTTTGCTTATCACG 2143 Query 27109 CCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTAGCG 27168 ||| |||| | || || | | | || | || || || || ||||| || || Sbjct 2144 CCAGCTTTCAGAGGTTGCCAGTGTAATGTTTGTCACAGCCCCTCCATTTGGCATATACCG 2203 Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGA 27197 ||||||||||| | || |||||||||| Sbjct 2204 GACTTCTGGATCTTGACCCAAATTACCGA 2232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133221519731760