Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq494847 181 6e-41 >seq494847 Length=1062 Score = 181 bits (200), Expect = 6e-41 Identities = 467/700 (67%), Gaps = 25/700 (4%) Strand=Plus/Minus Query 821 GGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTG 880 |||| | | || |||| |||||||| |||||||||||| | || || ||| || Sbjct 721 GGCACGCCCAAAAATGACCGCACCGGAACCGGCACGCTGTCGATTTTTGGTCATCAGATG 662 Query 881 CGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCG 940 || | | | || || || || |||||||||||||| ||| ||| || || Sbjct 661 CGTTTCAATCTGCAGGACGGTTTTCCGCTGGTCACCACCAAGAAGTGCCATTTGCGCTCT 602 Query 941 GTTGCGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGAC 1000 | | || || ||||||||||| | || ||||| ||| | || || || Sbjct 601 ATCATTCATGAGCTGCTGTGGTTCCTTAACGGTGACACTAACATCGCCTACCTGAAGGAA 542 Query 1001 AACGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTAC 1060 || || | |||||||||||||||||||| | || ||||||| || || || Sbjct 541 AATAAGGTGTCGATCTGGGACGAGTGGGCCGATGAAAAGGGTGACCTCGGGCCGGTTTAT 482 Query 1061 GGCGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTG-GATTGACCAGAT 1119 ||| |||||||| |||| || | | |||| | || ||| |||||| | Sbjct 481 GGCAAACAGTGGCGCAGCTGGG-------GGGCAGCGGATGGGCGCCAGATCGACCAGCT 429 Query 1120 ---CTCGGCCGCCGTGGAGCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATC 1176 | || | || ||||| |||| ||| ||||||||||| | | | || || Sbjct 428 GAGCAAGGTGGTCGAACAGCTGAAAAGCGA---CCCGGACTCGCGCCGCATCATCGTTTC 372 Query 1177 CGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCA 1236 |||||||||||||| || || || ||||| || |||||||||| | ||||| Sbjct 371 TGCATGGAACGTCGGCGAACTGGATGAGATGGCGCTGGCCCCGTGCCACGCGTTCTTCCA 312 Query 1237 GCTGTACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCGGACATGT 1295 | | ||||| | |||||| |||||| |||| | | || |||||| | || || | Sbjct 311 GTTCTACGTTGCGGACGGCAAGCTCTC-CTGCCAACTGTATCAGCGCTCCTGCGATATCT 253 Query 1296 TCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGC 1355 ||||||| ||||||||||||||||| ||||| | || | ||| ||| | || |||| Sbjct 252 TCCTCGGCCTGCCGTTCAATATCGCCAGCTACGCTTTGCTGGTGCATATGATGGCCCAGC 193 Query 1356 AGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACA 1415 || || |||| |||||||| | |||||||||| ||||| ||| | |||| || Sbjct 192 AGTGCGACCTGGAAGTGGGTGATTTTGTCTGGACCGGTGGCGATACCCATCTGTACAGCA 133 Query 1416 ACCACGTCGACCAGGCGCTGATGCAGCT-CCGC-CGACGACCGCG-GCCCTACCCGAGGC 1472 ||||| | || ||| ||| ||||||| ||| ||| |||||| ||||| |||| || Sbjct 132 ACCACCTGGAGCAGACGCGCCTGCAGCTGACGCGCGA--ACCGCGCGCCCT-GCCGAAGC 76 Query 1473 TCGTGCTACACCACGCGCC---GTCGATCTTCGACTACCG 1509 | | | | | | ||| ||| ||||||||||| || Sbjct 75 TGATTATCAAGCGCAAGCCGGAGTCTATCTTCGACTATCG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 294329461988121