Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq93888 104 9e-18 >seq93888 Length=1140 Score = 104 bits (114), Expect = 9e-18 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 52073 CATTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATAC 52132 ||| || || || |||||||| || || || ||| | |||||| |||| || |||||| | Sbjct 23 CATCGTATCGGCATGGAATGTTGGAGAGTTAGATAAAATGGCGCTGGCACCTTGCCATGC 82 Query 52133 ACTATTCCAATTCTATGTAGCTGAA-GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTG 52191 | ||||||||||| || | |||| || || || ||||| | |||||||| ||| Sbjct 83 CTTTTTCCAATTCTACGTCG-TGAATGGCAAACTCAGTTGCCAGCTCTATCAGCGCTCTT 141 Query 52192 CCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGA 52251 || | || || ||| | || ||||| || ||||||||| | | ||| ||| || Sbjct 142 GTGATGTCTTTTTAGGCTTACCCTTTAATATCGCCAGCTATGCGCTACTGGTCCATATGG 201 Query 52252 TTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGA 52303 | |||| |||||| || || || || || || || ||||||| || ||||| Sbjct 202 TCGCTC-AGCAGTGTGATCTCGAAGTCGGCGATTTTGTTTGGACAGGGGGCGA 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188969063506810