Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20urartu_20[genbank_20GCA_5F000347455.1_202013-04-02] 499,221 sequences; 3,747,047,519 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq255299 96.9 2e-15 seq366053 93.3 3e-14 seq70204 84.2 1e-11 >seq255299 Length=12406 Score = 96.9 bits (106), Expect = 2e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 7852 CGCCATTAGCTCAGATGGATAGAGCATCTGCCTTCTAAGTAGATGGTCACGGGTTCGAAT 7911 |||| ||||||||| ||||||||||| | |||||||||| | |||||| ||||||||| Sbjct 3369 CGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAAT 3310 Query 7912 CCTGTATGGCGTACCAAT 7929 |||||| ||||||||||| Sbjct 3309 CCTGTAGGGCGTACCAAT 3292 >seq366053 Length=223 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 7852 CGCCATTAGCTCAGATGGATAGAGCATCTGCCTTCTAAGTAGATGGTCACGGGTTCGAAT 7911 |||| ||||||||| ||||||||||| | |||||||||| | |||||| ||||||||| Sbjct 148 CGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCACAGGTTCGAAT 207 Query 7912 CCTGTATGGCGTACCA 7927 |||||| ||||||||| Sbjct 208 CCTGTAGGGCGTACCA 223 >seq70204 Length=1350 Score = 84.2 bits (92), Expect = 1e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 7852 CGCCATTAGCTCAGATGGATAGAGCATCTGCCTTCTAAGTAGATGGTCACGGGTTCGAAT 7911 |||| ||||||||| ||||||||||| | |||||||||| | ||||| ||||||||| Sbjct 1005 CGCCCTTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGTAGGTCATAGGTTCGAAT 946 Query 7912 CCTGTATGGCGTACCAATT 7930 ||| || ||||||||| || Sbjct 945 CCTATAGGGCGTACCATTT 927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333532679464327