Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq53 82.4 7e-11 >seq53 Length=1478458 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | ||||| |||| || || ||||| ||| ||| || | | Sbjct 997205 ATGCAAATCTTCGTGAAAACTCTGACAGGGAAGACCATCACCCTCGAGGTCGAGAGCTCT 997264 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || || ||| || || || || | || ||| || Sbjct 997265 GACACTATTGACAATGTAAAAGCTAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 997324 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||| || || || || || || || || ||| || ||| | || |||||||| Sbjct 997325 CAAAGACTCATTTTCGCCGGGAAGCAGCTCGAGGATGGCAGAACCCTAGCTGATTACAAC 997384 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || |||||||| ||||||||||| ||||| ||||| | || || ||| Sbjct 997385 ATCCAGAAGGAGTCTACTCTTCATCTGGTGCTACGACTTCGCGGTGGG 997432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428331322570880