Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq10 104 3e-17 seq81 86.0 9e-12 >seq10 Length=3646474 Score = 104 bits (114), Expect = 3e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATC 146106 || |||||||| |||||||| || | || | || || || ||| || ||||||||||| Sbjct 674525 GTGCCACCTCTTAGTCTTAAGACAAGGTGAAGTGTTGACTCCTTTTGA-ATATTATAATC 674583 Query 146107 TGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGG 146166 | ||| |||| | ||| || || || ||||||||||| |||| |||||||||||| || Sbjct 674584 AGCAAGGGTTCGTCCATCTTCCAACTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCTGG 674643 Query 146167 AGGAATTCCTTCTTTATCTTG 146187 ||| || ||||| || || || Sbjct 674644 AGGTATACCTTCCTTGTCCTG 674664 >seq81 Length=1043490 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||||||||| ||||| || |||| || | || || ||||| ||||||||||| Sbjct 708349 GTTCCACCTCTGAGTCTCAAAACCAGGTGAAGTGTTGACTCTTTCTGAATATTATAATCA 708290 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | ||| |||| | ||| || ||||| || || ||||| || | | |||||||| ||| Sbjct 708289 GCAAGGGTTCGTCCATCCTCCAATTGCTTCCCGGCAAAGATTAGCCGCTGCTGATCGGGA 708230 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || ||||| || || || Sbjct 708229 GGTATACCTTCCTTGTCCTG 708210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743518072504320