Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq34 141 6e-29
seq251 132 3e-26
seq2 122 6e-23
seq53 118 7e-22
seq300 116 2e-21
seq143 116 2e-21
seq32 105 4e-18
>seq34
Length=3699824
Score = 141 bits (156), Expect = 6e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | |||||||||||| | |||| || ||||| |||||||| || |
Sbjct 905272 CCACCGCGAAGTCGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCA 905331
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| |||||||| || || ||||| ||||||| |||||||| ||
Sbjct 905332 AGGGTACGACCGTCTTCCAACTGTTTCCCAGCGAAGATGAGCCTTTGCTGGTCCGGAGGA 905391
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| || ||| ||||| || | | |||| |||| ||||||
Sbjct 905392 ATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCGATCGTGTCGGAGCTTTCGACC 905451
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| || ||||| |||||||| |||||||||||||||
Sbjct 905452 TCGAGAGTGATGGTCTTCCCGGTTAGAGTTTTGACAAAGATCTGCATC 905499
Score = 134 bits (148), Expect = 9e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || |||||| || | ||| || || ||||| || ||||||||||
Sbjct 905044 CCGCCACGGAGACGCAACACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCA 905103
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| ||||||||||| || || ||||| |||| ||||||||| |||
Sbjct 905104 AGGGTACGGCCGTCTTCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 905163
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| |||||| ||| | || | | || | || | |||||
Sbjct 905164 ATACCTTCCTTGTCCTGAATCTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCGACT 905223
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| || || |||||||| ||||| |||||||||||
Sbjct 905224 TCCAAGGTGATGGTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCAT 905270
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | |||||||||||| | ||| || || ||||| || ||||||||||
Sbjct 904816 CCACCGCGGAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCA 904875
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| ||||| ||||| || || ||||| |||| ||||||||| |||
Sbjct 904876 AGGGTACGGCCGTCTTCCAATTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCCGGGGGA 904935
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | |||||||| || ||||| ||| | | | || | ||| | || |
Sbjct 904936 ATACCTTCCTTGTC--CTGAATTTTGGCCTTCACGTTATCGATAGTATCCGAACTCTCAA 904993
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | ||||| || ||||| || || || ||||| |||||||||||
Sbjct 904994 CTTCAAGAGTGATCGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 905042
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | |||||||| || | |||||| || ||||| |||||||||||||
Sbjct 904588 CCACCACGCAGACGAAGCACCAGATGGAGAGTACTCTCCTTCTGAATGTTGTAGTCGGCA 904647
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| |||| |||||| || || || || |||| |||||| || ||
Sbjct 904648 AGGGTGCGGCCGTCCTCCAGCTGCTTCCCAGCAAATATCAGCCTCTGCTGATCCGGAGGG 904707
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || || ||||| || || ||| | || | |||| || | || ||
Sbjct 904708 ATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTATCGATCGTGTCCGAGCTCTCCACC 904767
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| || ||||| || || || ||||| || |||||
Sbjct 904768 TCCAGGGTGATGGTCTTTCCGGTAAGGGTCTTTACAAATATTTGCAT 904814
>seq251
Length=123057
Score = 132 bits (146), Expect = 3e-26
Identities = 161/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| || ||||| | || ||| ||||| ||||| || || | ||| ||| ||
Sbjct 99201 CTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCGAGCGTGCGGCCG 99260
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| || | ||||||||| ||||||||||||| ||||||||| ||| | || |||||||
Sbjct 99261 TCCTCGAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 99320
Query 34295 TCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGAT 34353
|| ||| || ||||| | | | | || | ||| | || ||||| |||| |||||
Sbjct 99321 TCTTGGATC-TTGGCTTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCCAGGGTGAT 99379
Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||| |||||||||||||| || || ||||||||||||
Sbjct 99380 GGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATC 99416
Score = 120 bits (132), Expect = 2e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| |||||||| || | ||| ||| | || |||| |||||| || || ||
Sbjct 98546 TCTTTCTGGATGTTGTAATCAGCAAGCGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAG 98605
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||||| |||||| || ||| | || ||||||||| ||||| ||| | | |
Sbjct 98606 ATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 98665
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | || ||||| || | |||||||| |||||||||||||| || |||
Sbjct 98666 TCGATGGTATCTGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACA 98725
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 98726 AAGATCTGCAT 98736
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|||||||| || | |||| || ||||| || ||||| || | || ||| ||||
Sbjct 98297 AGCACCAGATGCAGAGTAGACTCCTTCTGAATATTGTAATCTGCAAGGGTGCGGCCGTCT 98356
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || |||||||||||||| || ||| | || |||||| ||
Sbjct 98357 TCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCT 98416
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | ||| | ||| || || || | ||||| ||
Sbjct 98417 TGGATCTTCGCCTTCACATTATCAATAGTATCAGACGACTCAACCTCGAGGGTGATTGTC 98476
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||||||| || ||||| |||||||||||
Sbjct 98477 TTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 98508
>seq2
Length=5918456
Score = 122 bits (134), Expect = 6e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219
|| || ||||| || | ||||||||||| | || ||| ||||| || ||||||||
Sbjct 562146 AACCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCT 562087
Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279
| || ||| | || || | |||||| || || || || |||| ||||||||| |
Sbjct 562086 GCTAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAATATAAGCCTCTGCTGGTCCGGG 562027
Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339
|| | | |||||| || |||||| ||| | || | | |||| ||||| ||||||
Sbjct 562026 GGGATACCCTCCTTATCCTGTATCTTCGCCTTCACATTGTCGATCGTATCGGACGATTCA 561967
Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || | || ||||| ||||||||||| || |||||||| || |||||
Sbjct 561966 ACCTCTAGAGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAAATTTGCAT 561917
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | || |||| ||| | || || || ||||| |||||||| ||||
Sbjct 561231 CCGCCGCGGAGACGGAGGACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGCG 561172
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | |||| || | ||||||||| |||||||| |||| |||||| || ||
Sbjct 561171 AGTGTTCTCCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCTGGTGGG 561112
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| |||| | | | || | || | ||||| ||
Sbjct 561111 ATTCCCTCCTTGTCTTGAATCTTGGCTTTTACGTTGTCGATGGTGTCCGAGGATTCAACC 561052
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| ||||| ||||| || || |||||||||||||||
Sbjct 561051 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATC 561004
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||||||| | || ||| || || ||||| ||||||| |
Sbjct 561915 CCCCCGCGGAGGCGGAGCACCAGGTGGAGGGTTGATTCCTTTTGGATGTTATAGTCGGCC 561856
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | | | || ||||||||||||||||| ||||| | ||||||||| || |||
Sbjct 561855 AGAGTTCTGCCATCTTCCAACTGCTTGCCTGCAAAAATCAACCGCTGCTGATCCGGGGGG 561796
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 561795 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACC 561736
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || || |||||||| || || || || || |||||
Sbjct 561735 TCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 561689
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || || ||||| ||||||||||| |
Sbjct 561459 CCGCCGCGAAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGCG 561400
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | |||| || | ||||||||| |||||||| |||| ||||||||| ||
Sbjct 561399 AGGGTCCTCCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCCGGAGGG 561340
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | || | |||| || |||||
Sbjct 561339 ATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTATCGATAGTGTCGGAAGACTCGACC 561280
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | || || || || |||||||| || || || || ||||||||
Sbjct 561279 TCGAGGGTAATAGTCTTCCCGGTGAGGGTCTTGACGAAAATCTGCAT 561233
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | ||||||||||| | || ||| ||||| ||||||||||| | |
Sbjct 561687 CCCCCGCGAAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 561628
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | | | || ||||||||||||||||| ||||| | ||||||||| || |||
Sbjct 561627 AGAGTTCTGCCATCTTCCAACTGCTTGCCTGCAAAAATCAACCGCTGCTGATCCGGGGGG 561568
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | | | || | |||| || |||||
Sbjct 561567 ATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATAGTGTCGGAAGACTCGACC 561508
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | || || || || || ||||| || || || || ||||||||
Sbjct 561507 TCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 561461
>seq53
Length=1478458
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| ||||| | |||||||| || | ||| || || ||||| ||||||||||| |
Sbjct 998116 TCCGCCACGCAGACGAAGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGC 998057
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| |||| |||||| || || || ||||||| |||||||||| ||
Sbjct 998056 GAGGGTGCGGCCGTCCTCCAGCTGCTTCCCCGCAAAGATGAGCCTCTGCTGGTCGGGAGG 997997
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| | |||||||| || ||| ||||| | || | |||| ||| | || |
Sbjct 997996 GATCCCTTCCTTGTCCTGAAT-TTTAGCTTTAACATTATCGATCGTATCAGAGCTCTCCA 997938
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | |||||||| || ||||| || || |||||||| ||||||||
Sbjct 997937 CCTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 997889
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || |||| || ||||||| ||| ||||| || ||||| ||||| || || |
Sbjct 997659 CCACCACGCAACCGAAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCAGCA 997600
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| ||||||||||| || || || || |||| ||||||||| |||
Sbjct 997599 AGGGTACGGCCGTCCTCCAACTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGGGGA 997540
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | | | | |||| |||| |||||
Sbjct 997539 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACT 997480
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| || || || || ||||||||||| ||||| ||||||||||||
Sbjct 997479 TCCAAGGTTATTGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCATC 997432
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | |||||||| || | |||| || ||||| |||||||| || |
Sbjct 997431 CCACCGCGAAGTCGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCT 997372
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| | | | || || | |||||| || ||||||||||| | |||||||| ||
Sbjct 997371 AGGGTTCTGCCATCCTCGAGCTGCTTCCCGGCGAAAATGAGTCTTTGCTGGTCTGGAGGA 997312
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| |||| || | | || | || | |||||
Sbjct 997311 ATTCCCTCCTTGTCCTGAATCTTAGCTTTTACATTGTCAATAGTGTCAGAGCTCTCGACC 997252
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| || || || ||||||||||| ||||| ||||||
Sbjct 997251 TCGAGGGTGATGGTCTTCCCTGTCAGAGTTTTCACGAAGATTTGCATC 997204
>seq300
Length=293291
Score = 116 bits (128), Expect = 2e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| ||||| || | |||| || ||||| |||||||| || | || ||| ||||
Sbjct 10503 AGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGGCCGTCT 10562
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| |||||||| |||| |||||| || ||| | | |||||||||
Sbjct 10563 TCGAGCTGCTTGCCCGCGAAAATCAGCCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCC 10622
Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
|||||| ||||| | | | || | ||| | ||||| || |||| |||||| ||
Sbjct 10623 TGAATCTTT-GCTTTGACGTTATCAATTGTATCAGATGATTCAACCTCCAGCGTGATTGT 10681
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||| || || || |||||||||||
Sbjct 10682 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 10714
Score = 114 bits (126), Expect = 8e-21
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | ||| || | || ||||||||||| || |||||
Sbjct 10752 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGTCCATCCTCCAACTGCTTACCAGCGAAG 10811
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||||| ||||| || || | | ||||||||| |||||| ||| | | |
Sbjct 10812 ATGAGCCTTTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTG 10871
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||||| || ||||| || | ||||||||||| || ||||| || ||||||
Sbjct 10872 TCAATAGTATCGGAAGACTCGACCTCGAGGGTGATGGTTTTCCCAGTGAGCGTCTTCACA 10931
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 10932 AAGATCTGCAT 10942
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | || ||| ||||| ||||| | || || ||||| |||||||||||||
Sbjct 11172 CCTCCCCTCAACCTTAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCA 11231
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||| ||||| || || || |||| ||||||||| ||
Sbjct 11232 AGGGTGCGGCCATCCTCAAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGAGGA 11291
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||| || |||||| ||||| || | | || | ||| | || |||||
Sbjct 11292 ATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTGTCGATGGTATCCGAGGACTCGACC 11351
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct 11352 TCGAGGGTGATCGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 11398
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||||||||||| || ||| | || || | ||||||||| || ||
Sbjct 10979 TTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAA 11038
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316
||||||| ||||||||| || | | |||||||| ||| || ||||| | ||
Sbjct 11039 GATGAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGTCCTGGATC-TTGGCTTTAACAT 11097
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | ||| | || || || || | |||||||| ||||||||||| || ||||
Sbjct 11098 TGTCGATTGTATCTGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCA 11157
Query 34377 CAAAGATCTGCAT 34389
| |||||||||||
Sbjct 11158 CGAAGATCTGCAT 11170
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | || ||||| || ||||| | || || ||||| || ||||||||||
Sbjct 11400 CCTCCCCTCAACCTCAAAACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCA 11459
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| | || || | ||||||||| ||||| || | | ||||||||| |||
Sbjct 11460 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCCGGGGGG 11519
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| |||||| ||| | | | | || | || | || |||||
Sbjct 11520 ATTCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATGGTGTCCGAGGACTCGACC 11579
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || ||||| || || || ||||||||||||
Sbjct 11580 TCAAGGGTGATCGTCTTTCCTGTGAGGGTCTTAACGAAGATCTGCATC 11627
>seq143
Length=574977
Score = 116 bits (128), Expect = 2e-21
Identities = 160/220 (73%), Gaps = 8/220 (4%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| || ||||| | || ||| ||||| ||||| || || | ||| ||| ||
Sbjct 166507 CTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCGAGCGTGCGGCCG 166566
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| || | ||||||||| || || ||||||| ||||||||| ||| | || |||||||
Sbjct 166567 TCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTG 166626
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGA----ATCGGTCGATTCGACGTCCACCGT 34350
|| ||||| ||||| || | |||||| ||| | || ||||| || | ||
Sbjct 166627 TCTTGGATCTTG-GCTTT-GAC--GTTATCGATGGTATCCGAGGACTCGACCTCGAGGGT 166682
Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||| |||||||||||||| || || ||||||||||||
Sbjct 166683 GATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATC 166722
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|||||||| || | |||| || ||||| || ||||| || | || ||| ||||
Sbjct 165598 AGCACCAGATGCAGAGTAGACTCCTTCTGGATATTGTAATCTGCAAGGGTGCGGCCGTCT 165657
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || || |||||||||||||| || ||| | || |||||| ||
Sbjct 165658 TCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCT 165717
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | ||| | ||| ||||| || | ||||| ||
Sbjct 165718 TGGATCTTCGCCTTCACATTATCAATAGTATCAGACGACTCGACCTCGAGGGTGATCGTC 165777
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || ||||| || |||||||||||||||||
Sbjct 165778 TTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 165809
Score = 113 bits (124), Expect = 3e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| || ||||| | || ||| ||||| ||||| || || | ||| ||| ||
Sbjct 166051 CTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCGAGCGTGCGGCCG 166110
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| || | ||||||||| ||||| ||||||| |||||| || ||| | || |||||||
Sbjct 166111 TCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTG 166170
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | | | | || | ||| | || ||||| || | ||||||
Sbjct 166171 TCTTGGATCTTGGCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTGATG 166230
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||||||| ||||| || || |||||||||||
Sbjct 166231 GTCTTGCCGGTTAGAGTCTTGACGAAGATCTGCAT 166265
Score = 109 bits (120), Expect = 4e-19
Identities = 141/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| |||||||| || | ||| ||| | || |||| |||||| || |||||
Sbjct 165847 TCTTTCTGGATGTTGTAATCAGCAAGCGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAG 165906
Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||||||| |||||| || | |||| | | |||||| || ||||| ||| | |
Sbjct 165907 ATGAGCCTCTGCTGATCTGGCGGG-ATACCCTCCTTATCCTGGATCTTGGCCTTGACGTT 165965
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | || ||||| || | |||||||| |||||||||||||| || ||
Sbjct 165966 GTCAATAGTATCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGAC 166025
Query 34378 AAAGATCTGCAT 34389
|||||||||||
Sbjct 166026 GAAGATCTGCAT 166037
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234
|||| || ||||| | || ||| ||||| ||||| || || | ||| ||| |
Sbjct 166279 CTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCGAGCGTGCGGCCA 166338
Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294
|| || | |||||||| || || ||||||| |||||| || ||| | || |||||||
Sbjct 166339 TCCTCAAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGGGGAATGCCCTCCTTG 166398
Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354
|| ||||| ||| | | | | || | || | || ||||| || | ||||||
Sbjct 166399 TCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 166458
Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||||||||||||| || || |||||||||||
Sbjct 166459 GTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 166493
>seq32
Length=1954954
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | ||||||||| || ||||| | || || ||||| |||||||| || |
Sbjct 590294 CCTCCCCTCAGCCTCAGAACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCA 590353
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| || | |||||| || ||||| || |||| |||||| || ||
Sbjct 590354 AGGGTACGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGA 590413
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | |||| || | ||| || ||
Sbjct 590414 ATGCCCTCCTTGTCCTGGATCTTCGCCTTAACGTTGTCGATCGTGTCTGACGACTCAACC 590473
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| || ||||||||||| || || || || ||||||
Sbjct 590474 TCGAGGGTGATGGTCTTCCCGGTGAGAGTCTTAACGAATATTTGCATC 590521
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
|||||||| || ||||| | || || || || ||||||||||||| || ||||
Sbjct 589847 AGCCTCAGAACAAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCAAGGGTACGG 589906
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
|||| || | ||| ||||| || || || |||| |||||| || || | | ||||
Sbjct 589907 CCGTCTTCAAGCTGTTTGCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGAATACCCTCC 589966
Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351
||||| ||||| ||||| | | | |||| ||| | || || || |||| |||
Sbjct 589967 TTGTCCTGGATCTTCGCCTTTACGTTGTCAATCGTATCTGAAGACTCAACCTCCAAGGTG 590026
Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || || ||||| || || |||||||| |||||
Sbjct 590027 ATCGTCTTCCCAGTGAGTGTCTTGACAAAGATTTGCAT 590064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323068472053760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |