Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq34 147 5e-30 seq143 145 2e-29 seq2 143 6e-29 seq251 140 8e-28 seq300 132 1e-25 seq32 120 7e-22 seq27 98.7 2e-15 seq10 91.5 3e-13 seq91 89.7 1e-12 seq76 89.7 1e-12 seq1 89.7 1e-12 seq59 84.2 5e-11 >seq34 Length=3699824 Score = 147 bits (162), Expect = 5e-30 Identities = 174/233 (75%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | ||||| || || |||||||| |||||||| Sbjct 904816 CCACCGCGGAGACGCAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCA 904875 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| ||||| || || || || ||||| | ||| || || ||| Sbjct 904876 AGGGTACGGCCGTCTTCCAATTGCTTACCAGCAAAAATCAGCCTCTGCTG---GTCCGGG 904932 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---T 288420 || ||||| || ||||| ||||| || |||||||| || |||| ||| ||| Sbjct 904933 GGAATACCTTCCTTGTCCTGAATTTTGGCCTTCACGTTATCGATAGTATC---CGAACTC 904989 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||||||||| || || || ||||| ||||| |||||||| Sbjct 904990 TCAACTTCAAGAGTGATCGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 905042 Score = 120 bits (132), Expect = 7e-22 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| |||| || || || |||| || || || ||||| || || | Sbjct 905268 CATG-CCACCGCGAAGTCGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAAT 905326 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAG 288358 | || || || || |||||||| || ||||| || |||||||| || | |||| | | Sbjct 905327 CAGCAAGGGTACGACCGTCTTCCAACTGTTTCCCAGCGAAGATGAGCCTTTGCTGGTCCG 905386 Query 288359 AATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | || ||||| || || || |||||||| || || || || || || | ||| Sbjct 905387 GA---GGAATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCGATCGTGTCGGAGC 905443 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| ||||| ||||||||||| ||||| ||||| || |||||||| Sbjct 905444 TTTCGACCTCGAGAGTGATGGTCTTCCCGGTTAGAGTTTTGACAAAGATCTGCAT 905498 >seq143 Length=574977 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| | ||||| |||| |||| ||| || ||||| ||||| || ||| Sbjct 166039 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 166098 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 |||||||| ||||| || | || || || |||||||| || | ||| || |||| Sbjct 166099 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTG---ATCTGGG 166155 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || || ||||| || || || ||||| || || | ||| || || Sbjct 166156 GGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTATCCGAGGACTCG 166215 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 166216 ACCTCGAGGGTGATGGTCTTGCCGGTTAGAGTCTTGACGAAGATCTGCAT 166265 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| | ||||| |||| |||| ||| || ||||| ||||| || ||| Sbjct 166495 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 166554 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 |||||||| ||||| || | || || || || ||||| || | ||| || ||| Sbjct 166555 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTG---GTCTGGG 166611 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || || ||||| || ||||| ||||| || || | ||| || || Sbjct 166612 GGGATGCCCTCCTTGTCTTGGATCTTGGCTTTGACGTTATCGATGGTATCCGAGGACTCG 166671 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 166672 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 166721 Score = 140 bits (154), Expect = 8e-28 Identities = 172/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || |||| || || ||||| | || || || |||||||| || || Sbjct 165580 TGACCACCACGAAGTCGGAGCACCAGATGCAGAGTAGACTCCTTCTGGATATTGTAATCT 165639 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| |||||||| | || || || || ||||| || ||||| ||| || Sbjct 165640 GCAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGA---TCC 165696 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || ||||| ||||| ||||| ||||| || || |||| ||| ||| Sbjct 165697 GGGGGAATGCCCTCCTTATCTTGGATCTTCGCCTTCACATTATCAATAGTATCAGACGAC 165756 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| |||||||||||||| || || ||||| || || ||||||||| Sbjct 165757 TCGACCTCGAGGGTGATCGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCATT 165810 Score = 138 bits (152), Expect = 3e-27 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| | ||| || || || | || ||||| ||||| || || || || Sbjct 165810 TCCACCCCTGAGACGAAGGACAAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCAGC 165869 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 |||||||| || || || | || || || |||||||| || | ||| ||| ||||| Sbjct 165870 AAGCGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGA---TCTGG 165926 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||| || || ||||||||||| || || || ||||| || |||| ||| || || Sbjct 165927 CGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGATGACTC 165986 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 165987 GACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 166037 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| | ||||| |||| |||| ||| || ||||| ||||| || ||| Sbjct 166267 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 166326 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | ||| || || || ||||| || | ||| || ||||||| Sbjct 166327 AGCGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTG---ATCTGGG 166383 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || || ||||| || || | || || || Sbjct 166384 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCG 166443 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 166444 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 166493 >seq2 Length=5918456 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | || ||| |||||||| ||||||||||| Sbjct 561915 CCCCCGCGGAGGCGGAGCACCAGGTGGAGGGTTGATTCCTTTTGGATGTTATAGTCGGCC 561856 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || ||||| || || || ||||| || |||| ||||| ||| ||| Sbjct 561855 AGAGTTCTGCCATCTTCCAACTGCTTGCCTGCAAAAATCAACCGCTGCTGATCCGGGGGG 561796 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | ||| || || || Sbjct 561795 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACC 561736 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||||||||| || ||||||||||| || ||||| Sbjct 561735 TCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 561689 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || || || || | ||| ||| || ||||| || ||||| || Sbjct 561687 CCCCCGCGAAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 561628 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || ||||| || || || ||||| || |||| ||||| ||| ||| Sbjct 561627 AGAGTTCTGCCATCTTCCAACTGCTTGCCTGCAAAAATCAACCGCTGCTGATCCGGGGGG 561568 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| ||||| |||||||| || |||| ||| || || || Sbjct 561567 ATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATAGTGTCGGAAGACTCGACC 561508 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| || || ||||||||||| |||||||| Sbjct 561507 TCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 561461 Score = 127 bits (140), Expect = 5e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | || || || || | ||||| || || || || || |||| Sbjct 561463 CATG-CCGCCGCGAAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGT 561405 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| || | ||||| || | || || || ||||| ||||| | ||| || Sbjct 561404 CAGCGAGGGTCCTCCCGTCCTCGAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCCG 561345 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||| || ||||| |||||||| || |||| ||| || | Sbjct 561344 GAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTATCGATAGTGTCGGAAGACT 561285 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| || || ||||||||||| || ||||||||||| |||||||| Sbjct 561284 CGACCTCGAGGGTAATAGTCTTCCCGGTGAGGGTCTTGACGAAAATCTGCAT 561233 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | ||| ||| || |||||||| ||||| || Sbjct 562143 CCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATATTGTAGTCTGCT 562084 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| || || | || || || || || || || | ||| || ||| Sbjct 562083 AGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAATATAAGCCTCTGCTGGTCCGGGGGG 562024 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || ||||| ||||| || || || | |||| |||||| || Sbjct 562023 ATACCCTCCTTATCCTGTATCTTCGCCTTCACATTGTCGATCGTATCGGACGATTCAACC 561964 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || ||||| || || || ||||| Sbjct 561963 TCTAGAGTAATGGTCTTGCCGGTGAGGGTCTTCACAAAAATTTGCAT 561917 >seq251 Length=123057 Score = 140 bits (154), Expect = 8e-28 Identities = 172/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || |||| || || ||||| | || || || || ||||| || || Sbjct 98279 TGACCACCACGAAGTCGGAGCACCAGATGCAGAGTAGACTCCTTCTGAATATTGTAATCT 98338 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| |||||||| | || || || || ||||| || ||||| ||| || Sbjct 98339 GCAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGA---TCC 98395 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || ||||| ||||| ||||| ||||| || || |||| ||| ||| Sbjct 98396 GGGGGAATGCCCTCCTTATCTTGGATCTTCGCCTTCACATTATCAATAGTATCAGACGAC 98455 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| ||||| ||||||||||| || ||||| ||||| ||||||||| Sbjct 98456 TCAACCTCGAGGGTGATTGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATT 98509 Score = 136 bits (150), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| | ||||| |||| |||| ||| || ||||| ||||| || ||| Sbjct 99189 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 99248 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 |||||||| ||||| || | || || || ||||| || || | ||| || ||| Sbjct 99249 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTG---GTCTGGG 99305 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || || ||||| || ||||| ||||| || || | ||| || || Sbjct 99306 GGGATGCCCTCCTTGTCTTGGATCTTGGCTTTGACGTTGTCGATGGTATCCGAGGACTCG 99365 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 99366 ACCTCCAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 99415 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| | ||| || || || | ||| ||||| ||||| || || || || Sbjct 98509 TCCACCCCTGAGACGAAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGC 98568 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 |||||||| || || || | || || || || ||||| || | ||| ||| ||||| Sbjct 98569 AAGCGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGA---TCTGG 98625 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || || || |||||||| || || || ||||| || || | ||| || || Sbjct 98626 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTATCTGATGACTC 98685 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| ||||||||||| || |||||||| Sbjct 98686 GACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 98736 >seq300 Length=293291 Score = 132 bits (146), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || ||||| | || || || ||||| || || || Sbjct 10485 TGGCCACCACGGAGACGGAGAACCAGATGCAGAGTAGACTCCTTCTGGATGTTGTAATCT 10544 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| |||||||| | || || || ||||| ||||| | ||| ||| || Sbjct 10545 GCAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAAATCAGCCTCTGCTGA---TCC 10601 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| ||||| || || ||||| || || ||||| ||||| || || | ||| ||| Sbjct 10602 GGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTGACGTTATCAATTGTATCAGATGAT 10661 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 10662 TCAACCTCCAGCGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 10714 Score = 131 bits (144), Expect = 4e-25 Identities = 146/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| |||||||||||||| || || || || || || |||||| Sbjct 10752 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGTCCATCCTCCAACTGCTTACCAGCGAAG 10811 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | || || |||| |||||||| || || |||||||| || || || ||| Sbjct 10812 ATGAGCCTTTGCTG---ATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTAACG 10868 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| |||| || || || ||||| ||||| || ||||| || || ||||| Sbjct 10869 TTGTCAATAGTATCGGAAGACTCGACCTCGAGGGTGATGGTTTTCCCAGTGAGCGTCTTC 10928 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 10929 ACAAAGATCTGCAT 10942 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || || |||| ||| || || |||||||| |||||||| |||||||| || || || Sbjct 11418 ACAAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCAAGCGTGCGGCCATCCTCG 11477 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || |||||||||| | ||| || |||||||| || || |||||| Sbjct 11478 AGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 11537 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || || || ||||| || || | || || || || || || ||||||||||| Sbjct 11538 ATCTTTGCCTTAACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATCGTCTTT 11597 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| |||||||| Sbjct 11598 CCTGTGAGGGTCTTAACGAAGATCTGCAT 11626 Score = 114 bits (126), Expect = 3e-20 Identities = 157/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || || |||| ||| || || ||||| || |||||||| || ||||| || Sbjct 11184 CTTAGCACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCA 11243 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 || || | ||||| || || |||||||| | ||| || ||||| || || || Sbjct 11244 TCCTCAAGCTGTTTGCCGGCAAAGATCAGCCTCTGCTGG---TCTGGAGGAATGCCCTCC 11300 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 ||||||||||| || || || || || || || | ||| || || || ||||| ||| Sbjct 11301 TTATCCTGGATCTTTGCCTTTACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTG 11360 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || || ||||| ||||| |||||||| Sbjct 11361 ATCGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 11398 Score = 113 bits (124), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | || || ||||| | ||| ||| || ||||| || |||| Sbjct 10940 CATG-CCACCCCTAAGACGGAGAACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGT 10998 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||||||| ||||| || || || | || || || || ||||| || | ||| || Sbjct 10999 CGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCG 11058 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || ||||| || |||||||| || ||||| || || || || | ||| || | Sbjct 11059 GAGGAATCCCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCGATTGTATCTGAGGACT 11118 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 11119 CCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 11170 >seq32 Length=1954954 Score = 120 bits (132), Expect = 7e-22 Identities = 163/226 (72%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || || || ||||| |||| || || || ||||| || || || || || || || Sbjct 590303 AGCCTCAGAACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCAAGGGTACGG 590362 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 ||||| || | || || || |||||||| || | ||| ||| || || || || Sbjct 590363 CCGTCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCCTCC 590422 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || |||||||| ||||| || ||||| || || | || ||| || || ||||| ||| Sbjct 590423 TTGTCCTGGATCTTCGCCTTAACGTTGTCGATCGTGTCTGACGACTCAACCTCGAGGGTG 590482 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 || ||||||||||| |||||||| |||||||| |||| | |||||| Sbjct 590483 ATGGTCTTCCCGGTGAGAGTCTTAACGAATATTTGCA-TCTGTTAT 590527 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || |||||||| || || || |||||||| | ||||| || || ||| Sbjct 589874 TCCTTTTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCTTCAAGCTGTTTGCCGGCAAAG 589933 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| ||| || || || || || |||||||| ||||| || ||||| Sbjct 589934 ATAAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCCTGGATCTTCGCCTTTACGTTG 589993 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || | |||||||||||||| || || |||||||| Sbjct 589994 TCAATCGTATCTGAAGACTCAACCTCCAAGGTGATCGTCTTCCCAGTGAGTGTCTTGACA 590053 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 590054 AAGATTTGCAT 590064 Score = 111 bits (122), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || | ||| | ||| ||||| |||||||||||||| Sbjct 589607 TGGCCACCACGGAGGCGGAGCACCAAATGCAGGGTGGACTCTTTCTGGATATTATAGTCC 589666 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| || || || | || || || || ||||| || | ||| || || Sbjct 589667 GCTAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTG---GTCC 589723 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || |||||||| || || ||||| || ||||||| || || Sbjct 589724 GGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCTATAGTGTCTGAGGAC 589783 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| || || || ||||| || || || ||||| Sbjct 589784 TCCACCTCCAGAGTGATCGTCTTGCCCGTGAGTGTCTTAACAAAGATTTGCAT 589836 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || || || ||||| |||| || || || ||||| || || ||||| || || || Sbjct 590075 AGCCTCAGAACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGG 590134 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 ||||| || | || || || |||||||| || | ||| ||| || || || || Sbjct 590135 CCGTCCTCGAGCTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCCTCC 590194 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || |||||||| ||||| || ||||| || || | || || || || ||||| ||| Sbjct 590195 TTGTCCTGGATCTTCGCCTTGACGTTGTCAATCGTGTCTGATGACTCAACCTCGAGGGTG 590254 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||| || |||||||| || || ||||| Sbjct 590255 ATGGTCTTCCCGGTGAGCGTCTTGACAAAGATTTGCAT 590292 >seq27 Length=2003651 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 269119 GAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAAT 269178 || ||||| || |||| ||||||| | || |||| ||||| |||| | |||| Sbjct 1228573 GAATTCATCTGCAACGCGCTCCCATGCGCGTTGGTCGGAATGAACAGCGATTTAATGAGC 1228514 Query 269179 CAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTAC 269238 || |||||||||||||| |||||||| | || || |||||| || | ||| | ||| Sbjct 1228513 CAGTATATCGAATTCGTTGCTGATCGATTGCTCGGCGCTCTCGGTCATCACAAAATTTAC 1228454 Query 269239 AATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTC 269298 ||| |||||| |||| | ||||| |||| ||||| | || ||||| || ||| Sbjct 1228453 AATGTTGTGAATCCGTTCGATTGGATGGAGTTAATCTCGCTGCAGGGTAAGACTAATTTC 1228394 Query 269299 TTCGAAAAG 269307 ||||| ||| Sbjct 1228393 TTCGAGAAG 1228385 >seq10 Length=3646474 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || || || || || || || | |||||| ||| || ||||| ||||||| Sbjct 675554 CCTGGATCTTAGCCTTAACATTATCGATGGTATCGCTGCTTTCGACCTCGAGGGTGATCG 675613 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCT 288484 ||||||| |||| |||||| |||||||||||||| | || |||| Sbjct 675614 TCTTCCCCGTCAAAGTCTTCACGAATATCTGCATCTTCTTCTTCT 675658 >seq91 Length=938096 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| |||||||| || || ||||| || || || | ||| || || || ||| Sbjct 829293 CCTTCTTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCGACCTCG 829234 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || ||||| ||||| |||||||| Sbjct 829233 AGGGTGATCGTCTTCCCCGTGAGGGTCTTTACGAAGATCTGCAT 829190 >seq76 Length=1084166 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| |||||||| || || ||||| || || || | ||| || || || ||| Sbjct 660384 CCTTCTTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCGACCTCG 660443 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || ||||| ||||| |||||||| Sbjct 660444 AGGGTGATCGTCTTCCCCGTGAGGGTCTTTACGAAGATCTGCAT 660487 >seq1 Length=14257138 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| |||||||| || || || ||||| || || | ||| || || || ||| Sbjct 736954 CCTTCTTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCG 737013 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || ||||| ||||| |||||||| Sbjct 737014 AGGGTGATCGTCTTCCCCGTTAGGGTCTTCACGAAGATCTGCAT 737057 >seq59 Length=1347071 Score = 84.2 bits (92), Expect = 5e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 269118 AGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAA 269177 ||| ||||| || | || |||| ||| | || |||| ||||| ||||| |||| Sbjct 1070870 AGAATTCATCTGCAATGCACTCCCGTGTGCGTTGGTCGGAATGAACAGTGATCTGATGAG 1070811 Query 269178 TCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTA 269237 ||| |||||||||||||| |||||||| | || || ||||| ||| ||| | || Sbjct 1070810 TCAGTATATCGAATTCGTAGCTGATCGATTGATCGTTGCTCTCGGATATAGCAAAATTTA 1070751 Query 269238 CAA-TTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 || ||| ||||| |||| | ||||| | |||||| | | || ||||| || | Sbjct 1070750 TAACGTCG-CTAATCCTTTCGATTGGATGGAGTTGATTTCGTTGCAGGGGAAGACAAATT 1070692 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCA 269324 ||||||| ||| | || | ||||| || Sbjct 1070691 TCTTCGAGAAGAGAGTAGGAGACTACCA 1070664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179640857567488