Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq251 129 6e-25
seq34 125 7e-24
seq300 120 3e-22
seq143 120 3e-22
seq53 107 2e-18
seq2 107 2e-18
seq32 105 6e-18
seq10 82.4 7e-11
>seq251
Length=123057
Score = 129 bits (142), Expect = 6e-25
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||| || || |||||||| | | |||||| ||| || ||||| || |||
Sbjct 98540 GTGGACTCTTTCTGGATGTTGTAATCAGCAAGCGTGCGGCCATCCTCCAGCTGCTTACCA 98599
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | | ||||||||| || || ||||||||||||||| ||| || ||||
Sbjct 98600 GCAAAGATGAGCCTCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 98659
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| ||| || | |||||| |||| ||| | || |||||||| |||||
Sbjct 98660 ACGTTG-TCGATGGTATCTGATGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGT 98718
Query 127096 TTTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 98719 CTTGACAAAGATCTGCAT 98736
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||| | ||||| ||| | |||||||| || |||||||||||||| |
Sbjct 98282 CCACCACGAAGTCGGAGCACCAGATGCAGAGTAGACTCCTTCTGAATATTGTAATCTGCA 98341
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| || || ||||| || || || |||| | ||||||||||| || ||
Sbjct 98342 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGATCCGGGGGA 98401
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| || ||| ||| ||| | | || | || || | ||| ||
Sbjct 98402 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACATTATCAATAGTATCAGACGACTCAACC 98461
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || || ||||| || || || || || ||||||||
Sbjct 98462 TCGAGGGTGATTGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 98508
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| ||| || | || | ||| || || || || || || ||||| |
Sbjct 99189 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 99248
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || |||||| | || | | |||||| || || ||
Sbjct 99249 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAAATGAGCCTCTGCTGGTCTGGGGGG 99308
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||||||||| ||| || |||| |||| |||| ||| |||| ||||||
Sbjct 99309 ATGCCCTCCTTGTCTTGGATCTTGGCTTTGACGTTG-TCGATGGTATCCGAGGACTCGAC 99367
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || |||||||| ||||| || || || ||||||||
Sbjct 99368 CTCCAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 99415
>seq34
Length=3699824
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | ||||| ||||| || | |||||||| || || || |||||||| |
Sbjct 905272 CCACCGCGAAGTCGCAGCACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCA 905331
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| || || | |||||| |||||| |||| | | ||||| || |||||
Sbjct 905332 AGGGTACGACCGTCTTCCAACTGTTTCCCAGCGAAGATGAGCCTTTGCTGGTCCGGAGGA 905391
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| |||||| ||| | | |||| ||||| | || |||||
Sbjct 905392 ATTCCCTCCTTGTCTTGGATTTTTGCCTTTACATTGTCGATCGTGTCGGAGCTTTCGACC 905451
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | || || ||||| |||||||| ||||| ||||||||
Sbjct 905452 TCGAGAGTGATGGTCTTCCCGGTTAGAGTTTTGACAAAGATCTGCAT 905498
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||||||||| ||| | || ||| || || |||||||| ||| | | || ||
Sbjct 905056 CGCAACACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGCAAGGGTACGGCCG 905115
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || | ||| || ||||| | |||| | |||||| || || || || || ||||||
Sbjct 905116 TCTTCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTG 905175
Query 127019 TCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| | | ||| || | | || | |||||| | ||||||||||| | ||| |
Sbjct 905176 TCC-TGAATCTTTGCCTTCACATTGTCAATGGTGTCAGAGCTCTCGACTTCCAAGGTGAT 905234
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || || || ||||| || || || |||||||||
Sbjct 905235 GGTCTTCCCAGTGAGAGTCTTCACGAAGATCTGCATG 905271
>seq300
Length=293291
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || |||||||| ||| | | |||||| ||| || ||||| || |||
Sbjct 11430 GTGGACTCCTTCTGGATATTGTAGTCGGCAAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 11489
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||||| |||||| || || || || |||||||||||| ||| || |||
Sbjct 11490 GCGAAGATCAATCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTA 11549
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | |||||||| |||||| || | ||| | ||| || || || || ||
Sbjct 11550 ACGTTG-TCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATCGTCTTTCCTGTGAGGGT 11608
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 11609 CTTAACGAAGATCTGCAT 11626
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | | ||||| ||| || |||||||| ||
Sbjct 11202 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCAAGCTGTTTGCCG 11261
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| || ||||| ||||||||||| ||| ||| || |||
Sbjct 11262 GCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTT 11321
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||| |||| |||||| |||| ||| | ||| ||||| || || ||
Sbjct 11322 ACATTGTCGATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCTGTGAGGGTC 11381
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 11382 TTCACGAAGATCTGCAT 11398
Score = 100 bits (110), Expect = 3e-16
Identities = 143/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | | |||||| ||| || | ||| || |||
Sbjct 10746 GTTGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGTCCATCCTCCAACTGCTTACCA 10805
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | | |||||||| ||||| || |||||||||||| ||| || |||
Sbjct 10806 GCGAAGATGAGCCTTTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTA 10865
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | || || | | |||||| |||| ||| | ||||| || || || ||
Sbjct 10866 ACGTTG-TCAATAGTATCGGAAGACTCGACCTCGAGGGTGATGGTTTTCCCAGTGAGCGT 10924
Query 127096 TTTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 10925 CTTCACAAAGATCTGCATG 10943
>seq143
Length=574977
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| ||| || | || | ||| || || || || || || ||||| |
Sbjct 166039 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 166098
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || |||||| |||| | | ||||||||| || ||
Sbjct 166099 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGATCTGGGGGG 166158
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||||||||| ||| || ||||| |||| |||| ||| |||| ||||||
Sbjct 166159 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG-TCGATGGTATCCGAGGACTCGAC 166217
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||| ||||| || || || ||||||||
Sbjct 166218 CTCGAGGGTGATGGTCTTGCCGGTTAGAGTCTTGACGAAGATCTGCAT 166265
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| ||| || | || | ||| || || || || || || ||||| |
Sbjct 166267 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 166326
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || || || || ||||| |||| | | ||||||||| || ||
Sbjct 166327 AGCGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAAGATGAGCCTCTGCTGATCTGGGGGA 166386
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||||||||| ||| || ||||| |||| || | |||||||| ||||||
Sbjct 166387 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCCGAGGACTCGAC 166445
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||| ||||| || || || ||||||||
Sbjct 166446 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 166493
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||| | ||||| ||| | |||||||| || || ||||||||||| |
Sbjct 165583 CCACCACGAAGTCGGAGCACCAGATGCAGAGTAGACTCCTTCTGGATATTGTAATCTGCA 165642
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| || || ||||| || || || |||| | ||||||||||| || ||
Sbjct 165643 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCAAAGATGAGCCGCTGCTGATCCGGGGGA 165702
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| || ||| ||| ||| | | || | || || | ||||||
Sbjct 165703 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACATTATCAATAGTATCAGACGACTCGACC 165762
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | ||| || || || || || || ||||| ||||||||
Sbjct 165763 TCGAGGGTGATCGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCAT 165809
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| ||| || | || | ||| || || || || || || ||||| |
Sbjct 166495 CCACCCCTCAATCTCAAAACGAGGTGAAGCGTGGATTCCTTCTGGATGTTATAATCAGCG 166554
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || ||||| |||| | | |||||| || || ||
Sbjct 166555 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 166614
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|||||||||||||| ||| || |||| | |||| ||| |||| ||||||
Sbjct 166615 ATGCCCTCCTTGTCTTGGATCTTGGCTTTGACGTTATCGATGGTATCCGAGGACTCGACC 166674
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||| ||||| || || || ||||||||
Sbjct 166675 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 166721
>seq53
Length=1478458
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | ||| | ||||| ||| | |||||||| || || || |||||||| |
Sbjct 997431 CCACCGCGAAGTCGTAGCACCAGATGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCT 997372
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | ||| || ||||| || || ||| | || | || ||||| || |||||
Sbjct 997371 AGGGTTCTGCCATCCTCGAGCTGCTTCCCGGCGAAAATGAGTCTTTGCTGGTCTGGAGGA 997312
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| | | || || | | || | ||||| | ||||||||
Sbjct 997311 ATTCCCTCCTTGTCC-TGAATCTTAGCTTTTACATTGTCAATAGTGTCAGAGCTCTCGAC 997253
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || || || ||||||||||| || || || |||||
Sbjct 997252 CTCGAGGGTGATGGTCTTCCCTGTCAGAGTTTTCACGAAGATTTGCAT 997205
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || || || | |||||| || | || ||||| || || || || ||||| |
Sbjct 997659 CCACCACGCAACCGAAGCACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAATCAGCA 997600
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || | ||| || ||||| | |||| | |||||| || || ||
Sbjct 997599 AGGGTACGGCCGTCCTCCAACTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGGGGA 997540
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||||||| || || ||| | ||||| ||| ||||| | ||||||||
Sbjct 997539 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGT-CGATCGTGTCGGAGCTCTCGAC 997481
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | || || ||||| ||||| || || || ||||||||
Sbjct 997480 TTCCAAGGTTATTGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 997433
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| || || | || | ||||| ||| | || ||| || || || ||||| || |
Sbjct 998116 TCCGCCACGCAGACGAAGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGC 998057
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||||| || || ||||| || || || |||| | | |||||| ||||||||
Sbjct 998056 GAGGGTGCGGCCGTCCTCCAGCTGCTTCCCCGCAAAGATGAGCCTCTGCTGGTCGGGAGG 997997
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGT-TCGACGGTGTCCGTACTCTCGA 127064
|| || ||||||||| ||| ||| |||| | | |||| || || | ||||| |
Sbjct 997996 GATCCCTTCCTTGTCC-TGAATTTTAGCTTTAACATTATCGATCGTATCAGAGCTCTCCA 997938
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | ||| | || || ||||| || || || ||||||||||||||
Sbjct 997937 CCTCAAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACAAAAATCTGCAT 997889
>seq2
Length=5918456
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| ||||| | || | ||||| || | || || || ||||| || || || ||| ||
Sbjct 561915 CCCCCGCGGAGGCGGAGCACCAGGTGGAGGGTTGATTCCTTTTGGATGTTATAGTCGGCC 561856
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | ||| || | ||| || || || | ||||| ||||||||||| || ||
Sbjct 561855 AGAGTTCTGCCATCTTCCAACTGCTTGCCTGCAAAAATCAACCGCTGCTGATCCGGGGGG 561796
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| ||| ||| | |||| |||| |||||| | | ||| ||
Sbjct 561795 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCGGAAGACTCAAC 561737
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || || ||||| || || || || ||||| |||||
Sbjct 561736 CTCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTGACGAAAATTTGCAT 561689
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| ||||| | || | ||||| || | || || || || || || ||||| || ||
Sbjct 561687 CCCCCGCGAAGGCGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCC 561628
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | ||| || | ||| || || || | ||||| ||||||||||| || ||
Sbjct 561627 AGAGTTCTGCCATCTTCCAACTGCTTGCCTGCAAAAATCAACCGCTGCTGATCCGGGGGG 561568
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||| ||||||||| ||| ||| ||| | | |||| ||||| | | ||||||
Sbjct 561567 ATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATAGTGTCGGAAGACTCGACC 561508
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||| ||| | || || || || || || || || ||||||||||||
Sbjct 561507 TCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCATG 561460
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| | |||| | |||||| || ||||| || |||||||||
Sbjct 561387 TCCTCGAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGGTCCGGAGGGATACCCTCCTTG 561328
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| || ||| ||| | | |||| ||||| | | |||||| |||| ||| |
Sbjct 561327 TCCTGAATCTTCGCCTTCACGTTATCGATAGTGTCGGAAGACTCGACCTCGAGGGTAATA 561268
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| || ||||| || || || || ||||||||||||
Sbjct 561267 GTCTTCCCGGTGAGGGTCTTGACGAAAATCTGCATG 561232
>seq32
Length=1954954
Score = 105 bits (116), Expect = 6e-18
Identities = 146/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||||||| | | || || || || ||||| || ||
Sbjct 590096 GTCGACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCGTCCTCGAGCTGCTTCCCG 590155
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | | ||||||||| ||||| ||||||||||||||| ||| ||| ||||
Sbjct 590156 GCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTG 590215
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||||| | ||| || |||| ||| | || || ||||| || ||
Sbjct 590216 ACGTTG-TCAATCGTGTCTGATGACTCAACCTCGAGGGTGATGGTCTTCCCGGTGAGCGT 590274
Query 127096 TTTTACAAAAATCTGCATGGCT 127117
|| ||||| || |||||| ||
Sbjct 590275 CTTGACAAAGATTTGCATGCCT 590296
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || |||||||| | | || || || || ||||| || ||
Sbjct 590324 GTCGACTCCTTCTGGATGTTGTAATCCGCAAGGGTACGGCCGTCCTCGAGCTGCTTCCCG 590383
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | | ||||||||| ||||| ||||||||||||||| ||| ||| |||
Sbjct 590384 GCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTA 590443
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| ||||| | ||| || |||| ||| | || || ||||| |||||
Sbjct 590444 ACGTTG-TCGATCGTGTCTGACGACTCAACCTCGAGGGTGATGGTCTTCCCGGTGAGAGT 590502
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || || || |||||
Sbjct 590503 CTTAACGAATATTTGCAT 590520
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||||||| | || |||||||| || ||||| || || |
Sbjct 589610 CCACCACGGAGGCGGAGCACCAAATGCAGGGTGGACTCTTTCTGGATATTATAGTCCGCT 589669
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || ||||| |||| | | |||||| || || ||
Sbjct 589670 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGA 589729
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||| | | || | ||||| | ||| ||
Sbjct 589730 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCTATAGTGTCTGAGGACTCCACC 589789
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| ||||| || || || || ||||| || |||||
Sbjct 589790 TCCAGAGTGATCGTCTTGCCCGTGAGTGTCTTAACAAAGATTTGCAT 589836
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| || ||||| ||| | | || || || || |||||||| ||
Sbjct 589868 GTCGACTCCTTTTGGATGTTGTAGTCGGCAAGGGTACGGCCGTCTTCAAGCTGTTTGCCG 589927
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | | ||||||||| ||||| || |||||||||||| ||| ||| |||
Sbjct 589928 GCAAAGATAAGCCTCTGCTGATCCGGAGGAATACCCTCCTTGTCCTGGATCTTCGCCTTT 589987
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | || || | | ||| || || | ||| | ||| || || || || ||
Sbjct 589988 ACGTTG-TCAATCGTATCTGAAGACTCAACCTCCAAGGTGATCGTCTTCCCAGTGAGTGT 590046
Query 127096 TTTTACAAAAATCTGCATGGCT 127117
|| ||||| || |||||| ||
Sbjct 590047 CTTGACAAAGATTTGCATGCCT 590068
>seq10
Length=3646474
Score = 82.4 bits (90), Expect = 7e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||||||||| ||||| | | || || ||| || | ||| ||||||
Sbjct 674558 GTTGACTCCTTTTGAATATTATAATCAGCAAGGGTTCGTCCATCTTCCAACTGCTTTCCA 674617
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021
|| |||||| || |||||||| |||||||| || |||||||||
Sbjct 674618 GCAAAGATCAGTCTTTGCTGATCTGGAGGTATACCTTCCTTGTCC 674662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475495474391040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |