Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq321 488 7e-133 >seq321 Length=132638 Score = 488 bits (540), Expect = 7e-133 Identities = 498/647 (77%), Gaps = 2/647 (0%) Strand=Plus/Plus Query 7695 TGCT-AACACCAAGAGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAG 7753 |||| || ||| | ||||||||||||||| || || || ||||| || || | |||||| Sbjct 86406 TGCTCAATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAAAAGAAG 86465 Query 7754 TGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCG 7813 || || ||||| ||||||||||| ||| ||||||||||||| || ||||| || || Sbjct 86466 TGTAGGGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCA 86525 Query 7814 TGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGG 7873 |||||||| ||||| ||||| || ||||| ||||||||||| | ||||| | || Sbjct 86526 TGAGCAGCTACGATATTGTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCA 86585 Query 7874 GACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCA 7933 || || || |||||||| | | || | ||||||||| | ||||||||||| ||| Sbjct 86586 GATTCGTTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCA 86645 Query 7934 CTGAACAGAGAACCACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGG 7993 ||||| || ||||| || || |||||||| || || | ||||||||| || ||||| ||| Sbjct 86646 CTGAATAGGGAACCGCCGAATACACCAGCTACTCCTAACATGTGGAATGGATGCATAAGG 86705 Query 7994 ATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGC 8053 ||||||||||| || ||||| |||| |||| ||||||| ||||| || || || | |||| Sbjct 86706 ATGTTGTGCTCCGCCTGGAATACAATCATGAAGTTGAAAGTACCTGATATTCCTAAAGGC 86765 Query 8054 ATAGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCA 8113 ||| | ||||| ||| |||||||||| ||| |||| | ||| ||||||| || || Sbjct 86766 ATACCATCAGAAAAACTTCCTTGACCGATAGGGTAGATCAAGAAAACAGCAGTAGCAGCT 86825 Query 8114 GCAACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGT 8173 ||||| ||||| || ||||| ||| ||||| ||||||||||| |||||| || |||| Sbjct 86826 GCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGT 86885 Query 8174 TCCCACTCACGACCCATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGG 8233 |||||||||||||||||||| | | ||| | | |||||| | | || |||| Sbjct 86886 TCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCA 86945 Query 8234 AAAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAG 8293 ||||||| || ||||| | ||||||||||| ||| |||||||||||||| || ||||| Sbjct 86946 TAAGGACCGCCATTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATCGGGTAGAAA 87005 Query 8294 TGGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGA-GATGA 8339 || | ||| ||||| ||||| ||||| || |||||||| ||||| Sbjct 87006 TGCAAACCTATAGCTGCAGAAGTAGGAATAATCGCACCAGAGGATGA 87052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622117832202240