Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq321 434 1e-116 >seq321 Length=132638 Score = 434 bits (480), Expect = 1e-116 Identities = 476/632 (75%), Gaps = 1/632 (0%) Strand=Plus/Minus Query 163966 TCATC-TCTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCATT 164024 ||||| |||||||| || |||| | || || || ||| | || |||||||| || Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993 Query 164025 TGGGAAGCCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGTC 164084 |||||||| ||||| ||||||| ||| | ||||| || ||||||| |||| | || Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933 Query 164085 TTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTGTCTTACCGT 164144 | |||||| | | ||| | | ||||||||||||||||||||||| || |||| Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873 Query 164145 CTTGGTATGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCA 164204 || |||||||||||||||||| |||||| || || || || |||||||| || | || Sbjct 86872 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 86813 Query 164205 GTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATC 164264 || ||| || |||| ||| |||||||||| || ||||| | ||||| | || || Sbjct 86812 GTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATA 86753 Query 164265 TCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCACCCC 164324 || || || ||||||| |||| | || ||||| || |||||||||||||| ||||| || Sbjct 86752 TCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 86693 Query 164325 TTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGT 164384 ||||| ||| | || || ||||| ||||| |||||||| || |||||||| ||||| ||| Sbjct 86692 TTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 86633 Query 164385 TCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGT 164444 || |||| || ||| || | | |||||||| |||| || || || | ||| Sbjct 86632 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGT 86573 Query 164445 TACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGT 164504 |||| || |||||||| |||||||| ||||| || || || ||||| ||||| ||||| Sbjct 86572 TACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGC 86513 Query 164505 CGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCT 164564 || ||||||||||||| ||| ||||||||||| |||||| | |||||||| | ||| Sbjct 86512 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCT 86453 Query 164565 GCATGGCCTGTTGTTGGCATCTGGTTCACCGC 164596 || |||||||| || || ||||||||||| || Sbjct 86452 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGC 86421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556918562442240