Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31]
896 sequences; 295,462,401 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq321 412 4e-110
>seq321
Length=132638
Score = 412 bits (456), Expect = 4e-110
Identities = 481/647 (74%), Gaps = 2/647 (0%)
Strand=Plus/Minus
Query 164945 TCATC-TCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATT 165003
||||| |||||||| | |||| ||||| || || || | || ||||| || ||
Sbjct 87052 TCATCCTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTCTACCCGATC 86993
Query 165004 TGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTC 165063
|||||||| ||| | | ||||| ||||| ||||| || |||||||| | | ||||
Sbjct 86992 TGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAACTAATTGTT 86933
Query 165064 TTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGC 165123
| |||||| | | ||||||||||| ||||||||||||||||||||||| || |||
Sbjct 86932 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 86873
Query 165124 CTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCA 165183
|| |||||||||||||||||| || |||||| || ||||| || |||||| | ||
Sbjct 86872 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 86813
Query 165184 GTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATC 165243
|||||| || |||| ||| |||||||||| ||||| ||||||||||||||| | || ||
Sbjct 86812 GTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTTTAGGAATA 86753
Query 165244 TCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCG 165303
|| |||||||| |||| ||| | || ||||| || || || ||||| |||||||||||
Sbjct 86752 TCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 86693
Query 165304 TTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGA 165363
||||||||| | || || ||||| |||||||| || || || ||| ||||||||||||
Sbjct 86692 TTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 86633
Query 165364 AGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGT 165423
| || || || | || | || || || |||| || | || | |||
Sbjct 86632 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAATCTGCTAATGAAGGT 86573
Query 165424 TATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGT 165483
|| | || || ||||| ||||| || || || ||||| ||||| || || || || ||
Sbjct 86572 TACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCTCATGGTTATTTTGGC 86513
Query 165484 CGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCA 165543
|| | || |||||||| || |||||||| || ||||| || |||||||| | ||
Sbjct 86512 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTACACTTCTTTTTGGCT 86453
Query 165544 GCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTT-AGCA 165589
|| ||||||||||| |||||||||||||||||| | ||| || ||||
Sbjct 86452 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTGAGCA 86406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563654486999040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |