Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq321 462 2e-125 >seq321 Length=132638 Score = 462 bits (512), Expect = 2e-125 Identities = 488/641 (76%), Gaps = 1/641 (0%) Strand=Plus/Plus Query 84130 TGCT-AACACCCAGAGCAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAG 84188 |||| || ||| | ||||| ||||| || || || || |||||||||||||| || ||| Sbjct 86406 TGCTCAATACCTAAAGCAGTGAACCAGATACCTACTACAGGCCAAGCAGCCAAAAAGAAG 86465 Query 84189 TGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCG 84248 || || |||||| |||||||| |||||| |||||||| | || || || || || Sbjct 86466 TGTAGGGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCA 86525 Query 84249 TGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGT 84308 |||||||| || ||||| |||||||| || ||||||||||| ||||||| | || Sbjct 86526 TGAGCAGCTACGATATTGTAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCA 86585 Query 84309 GAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCA 84368 || | |||||||| ||||| | ||| | | ||| || || | ||||||||||| ||| Sbjct 86586 GATTCGTTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCA 86645 Query 84369 GAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGG 84428 |||||| | || |||||||||||||| ||||| |||||||| || |||||||||||| Sbjct 86646 CTGAATAGGGAACCGCCGAATACACCAGCTACTCCTAACATGTGGAATGGATGCATAAGG 86705 Query 84429 ATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGC 84488 ||||| || ||||||||||| |||| |||| ||||||| || ||||| || || | ||| Sbjct 86706 ATGTTGTGCTCCGCCTGGAATACAATCATGAAGTTGAAAGTACCTGATATTCCTAAAGGC 86765 Query 84489 ATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCT 84548 || |||||||| ||| ||||| |||| ||| || | | ||| ||||||| || ||| Sbjct 86766 ATACCATCAGAAAAACTTCCTTGACCGATAGGGTAGATCAAGAAAACAGCAGTAGCAGCT 86825 Query 84549 GCAACTGGAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGT 84608 ||||| ||||| || || |||||| ||||| ||||||||||| ||||| | |||| Sbjct 86826 GCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGT 86885 Query 84609 TCCCATTCACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGA 84668 ||||| ||||||||||||||| | | |||||| | |||||| | |||| |||| | Sbjct 86886 TCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCA 86945 Query 84669 TAAGGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAA 84728 ||||| || ||||| |||| ||| || || | | |||||||||||| || || |||||| Sbjct 86946 TAAGGACCGCCATTGTATAACCACTCATCAACAGATGCTGCTTCCCAGATCGGGTAGAAA 87005 Query 84729 TGTAGACCAATAGCATTAGAGGATGGAACTACGGCACCAGA 84769 || | ||| ||||| ||| | |||| | |||||||| Sbjct 87006 TGCAAACCTATAGCTGCAGAAGTAGGAATAATCGCACCAGA 87046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571267201735680