Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xerophyta_20viscosa_20[genbank_20GCA_5F002076135.1_202017-03-31] 896 sequences; 295,462,401 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq321 282 1e-71 >seq321 Length=132638 Score = 282 bits (312), Expect = 1e-71 Identities = 420/596 (70%), Gaps = 0/596 (0%) Strand=Plus/Minus Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCA 26086 ||||| ||||||||||||||||| | | | || |||||| ||||||||||||| || Sbjct 87007 CATTTCTACCCGATCTGGGAAGCAGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCT 86948 Query 26087 TATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGG 26146 ||| |||| ||| | | ||||||||| | || ||||| || || | ||||| Sbjct 86947 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 86888 Query 26147 GAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTA 26206 ||||| || | | || || ||| | || ||||| |||||||||| |||| || | Sbjct 86887 GAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 86828 Query 26207 TCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGA 26266 | || ||| || || ||||| | || ||| |||| ||||| |||||| |||||| Sbjct 86827 GCAGCTGCTACTGCTGTTTTCTTGATCTACCCTATCGGTCAAGGAAGTTTTTCTGATGGT 86768 Query 26267 ATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAAT 26326 |||||| | || || || |||||||| ||||| ||| | |||||||| || || || || Sbjct 86767 ATGCCTTTAGGAATATCAGGTACTTTCAACTTCATGATTGTATTCCAGGCGGAGCACAAC 86708 Query 26327 ATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTC 26386 || || ||||| |||||||| ||| || || ||||| || ||||| || | || ||| Sbjct 86707 ATCCTTATGCATCCATTCCACATGTTAGGAGTAGCTGGTGTATTCGGCGGTTCCCTATTC 86648 Query 26387 GCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTC 26446 ||||||||| || ||||| || || | || ||||| ||||| | | Sbjct 86647 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAACGAA 86588 Query 26447 TCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCA 26506 || ||| | || || | || || ||||| ||||| || || ||||| || ||||| Sbjct 86587 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATCGTAGCTGCT 86528 Query 26507 CACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTT 26566 || || || ||||| |||| || || || ||||| ||||| || ||| ||||| || Sbjct 86527 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCCCTA 86468 Query 26567 CATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTAT 26622 || |||||| | ||| ||||||| || || || || ||| | || || | ||||| Sbjct 86467 CACTTCTTTTTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTAT 86412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146724838831104